Detailed information NTG0813311

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: MTS72_RS00770
• Genome accession: NZ_CP121595
• Coordinates: 157027..157887 (-)
• Length: 286 a.a.
• NCBI ID: WP_057078044.1
• Uniprot ID: A0A8I1ZA09
• Organism: Acinetobacter baumannii strain MAB17
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 152027..162887

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTS72_RS00745 (MTS72_00745)	-	152918..154228 (+)	1311	WP_002055139.1	tetratricopeptide repeat protein	-
MTS72_RS00750 (MTS72_00750)	-	154305..154631 (+)	327	WP_000099685.1	pyrimidine/purine nucleoside phosphorylase	-
MTS72_RS00755 (MTS72_00755)	rlmB	154733..155482 (+)	750	WP_001118149.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
MTS72_RS00760 (MTS72_00760)	-	155518..156432 (+)	915	WP_000075015.1	DMT family transporter	-
MTS72_RS00765 (MTS72_00765)	coaE	156429..157025 (-)	597	WP_000874125.1	dephospho-CoA kinase	-
MTS72_RS00770 (MTS72_00770)	pilD	157027..157887 (-)	861	WP_057078044.1	A24 family peptidase	Machinery gene
MTS72_RS00775 (MTS72_00775)	pilC	157887..159113 (-)	1227	WP_029423717.1	type II secretion system F family protein	Machinery gene
MTS72_RS00780 (MTS72_00780)	pilB	159143..160855 (-)	1713	WP_001274991.1	type IV-A pilus assembly ATPase PilB	Machinery gene
MTS72_RS00785 (MTS72_00785)	tpiA	161146..161940 (+)	795	WP_029423716.1	triose-phosphate isomerase	-
MTS72_RS00790 (MTS72_00790)	secG	161953..162282 (+)	330	WP_000555570.1	preprotein translocase subunit SecG	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32126.53 Da
• Isoelectric Point: 7.1041

>NTDB_id=813311 MTS72_RS00770 WP_057078044.1 157027..157887(-) (pilD) [Acinetobacter baumannii strain MAB17]
MQDIIAYFIQNLTALYIAVALVSLCIGSFLNVVIYRTPKMMEQDWQQECQMLLNPEQPIIDHEKLTLSKPASSCPACQQP
IRWYQNIPVISWLMLRGKCGHCQHPISIRYPAVELLTMLCSLVVVMVFGPTIQMFFGLVLTWVLIALTFIDFDTQLLPDR
FTLTLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIIYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=813311 MTS72_RS00770 WP_057078044.1 157027..157887(-) (pilD) [Acinetobacter baumannii strain MAB17]
ATGCAAGACATCATTGCGTATTTTATTCAAAACTTAACTGCACTTTATATTGCTGTTGCACTCGTGAGCCTATGTATCGG
TAGCTTTCTTAATGTAGTGATTTACCGCACGCCAAAAATGATGGAGCAAGATTGGCAGCAAGAATGCCAAATGTTACTCA
ATCCTGAGCAACCGATTATTGATCATGAGAAGTTAACTTTAAGTAAGCCTGCTTCATCGTGCCCTGCATGTCAGCAACCG
ATCCGTTGGTATCAAAATATTCCTGTTATAAGCTGGCTTATGTTAAGAGGAAAGTGTGGCCATTGCCAGCACCCGATTAG
TATTCGCTATCCAGCCGTCGAACTACTCACCATGCTATGTTCATTAGTAGTCGTCATGGTGTTTGGTCCAACCATACAAA
TGTTTTTTGGACTCGTCCTCACATGGGTACTGATAGCCCTTACCTTTATTGATTTCGATACACAATTATTGCCTGATCGC
TTTACCCTAACTTTAGCTGCGCTCGGCTTAGGTATTAATACCTTTAATATTTATACCTCACCCAACTCAGCCATTTGGGG
TTATCTCATTGGTTTCCTATGTCTTTGGATTATCTATTACTTATTTAAAGTGATCACTGGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTGCTTGCAGCATTAGGAGCATGGATGGGGCCATTGATGCTGCCGTTAATTGTGTTATTGTCATCGTTA
CTTGGCGCAATCATTGGTATCATTTTATTAAAATTAAGAAATGACAATCAGCCTTTTGCTTTTGGGCCATATATTGCCAT
TGCTGGTTGGGTTGCCTTTTTATGGGGTGATCAGATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (138-247)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (22-128)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter baumannii D1279779	97.552	100	0.976
pilD	Acinetobacter nosocomialis M2	97.203	100	0.972
pilD	Vibrio cholerae strain A1552	53.875	94.755	0.51
pilD	Vibrio campbellii strain DS40M4	51.661	94.755	0.49
pilD	Neisseria gonorrhoeae MS11	46.591	92.308	0.43