Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   QA712_RS06930 Genome accession   NZ_CP121539
Coordinates   1263590..1264876 (-) Length   428 a.a.
NCBI ID   WP_163656844.1    Uniprot ID   -
Organism   Lactococcus lactis strain MA5     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1258590..1269876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QA712_RS06915 (QA712_06915) - 1259781..1260317 (-) 537 WP_047206976.1 hypothetical protein -
  QA712_RS06920 (QA712_06920) - 1260323..1261654 (-) 1332 WP_153242315.1 FAD/NAD(P)-binding oxidoreductase -
  QA712_RS06925 (QA712_06925) - 1261670..1263520 (-) 1851 WP_029344534.1 proline--tRNA ligase -
  QA712_RS06930 (QA712_06930) eeP 1263590..1264876 (-) 1287 WP_163656844.1 RIP metalloprotease RseP Regulator
  QA712_RS06935 (QA712_06935) - 1264895..1265698 (-) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  QA712_RS06940 (QA712_06940) - 1265698..1266432 (-) 735 WP_003130589.1 isoprenyl transferase -
  QA712_RS06945 (QA712_06945) yajC 1266806..1267138 (-) 333 WP_003130588.1 preprotein translocase subunit YajC -
  QA712_RS06950 (QA712_06950) - 1267233..1267931 (-) 699 WP_153242317.1 DNA alkylation repair protein -
  QA712_RS06955 (QA712_06955) rlmH 1267950..1268429 (-) 480 WP_332529360.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46414.00 Da        Isoelectric Point: 6.5147

>NTDB_id=812873 QA712_RS06930 WP_163656844.1 1263590..1264876(-) (eeP) [Lactococcus lactis strain MA5]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPMIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=812873 QA712_RS06930 WP_163656844.1 1263590..1264876(-) (eeP) [Lactococcus lactis strain MA5]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATCGCTTTTATCGTTCTAACTTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGTCCAGTTGCTATTTATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGATGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGAATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.845

100

0.572

  eeP Streptococcus thermophilus LMD-9

56.613

100

0.57