Detailed information NTG0812830

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QA592_RS06795
• Genome accession: NZ_CP121529
• Coordinates: 1432613..1433587 (+)
• Length: 324 a.a.
• NCBI ID: WP_001831109.1
• Uniprot ID: A0A9Q5JKD6
• Organism: Staphylococcus epidermidis strain 1FSE03
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1427613..1438587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA592_RS06760	rpmG	1428093..1428242 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
QA592_RS06765	-	1428425..1428976 (+)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
QA592_RS06770	-	1428977..1430437 (+)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
QA592_RS06775	-	1430421..1430621 (+)	201	WP_001831138.1	YqgQ family protein	-
QA592_RS06780	-	1430621..1431607 (+)	987	WP_001831113.1	ROK family glucokinase	-
QA592_RS06785	-	1431607..1431933 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QA592_RS06790	-	1431933..1432556 (+)	624	WP_001831016.1	MBL fold metallo-hydrolase	-
QA592_RS06795	comGA	1432613..1433587 (+)	975	WP_001831109.1	competence type IV pilus ATPase ComGA	Machinery gene
QA592_RS06800	comGB	1433559..1434626 (+)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
QA592_RS06805	comGC	1434644..1434961 (+)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
QA592_RS06810	comGD	1434951..1435388 (+)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
QA592_RS06815	-	1435375..1435668 (+)	294	WP_001831116.1	hypothetical protein	-
QA592_RS06820	-	1435592..1436083 (+)	492	WP_002505402.1	competence type IV pilus minor pilin ComGF	-
QA592_RS06825	-	1436248..1436760 (+)	513	WP_002440040.1	shikimate kinase	-
QA592_RS06830	gcvT	1436978..1438069 (+)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37330.44 Da
• Isoelectric Point: 8.8174

>NTDB_id=812830 QA592_RS06795 WP_001831109.1 1432613..1433587(+) (comGA) [Staphylococcus epidermidis strain 1FSE03]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=812830 QA592_RS06795 WP_001831109.1 1432613..1433587(+) (comGA) [Staphylococcus epidermidis strain 1FSE03]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701