Detailed information NTG0812756

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QA624_RS06530
• Genome accession: NZ_CP121526
• Coordinates: 1051745..1052719 (-)
• Length: 324 a.a.
• NCBI ID: WP_001831109.1
• Uniprot ID: A0A9Q5JKD6
• Organism: Staphylococcus epidermidis strain 1FSE05
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1046745..1057719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA624_RS06495	gcvT	1047263..1048354 (-)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-
QA624_RS06500	-	1048572..1049084 (-)	513	WP_002440040.1	shikimate kinase	-
QA624_RS06505	-	1049249..1049740 (-)	492	WP_002505402.1	competence type IV pilus minor pilin ComGF	-
QA624_RS06510	-	1049664..1049957 (-)	294	WP_001831116.1	hypothetical protein	-
QA624_RS06515	comGD	1049944..1050381 (-)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
QA624_RS06520	comGC	1050371..1050688 (-)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
QA624_RS06525	comGB	1050706..1051773 (-)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
QA624_RS06530	comGA	1051745..1052719 (-)	975	WP_001831109.1	competence type IV pilus ATPase ComGA	Machinery gene
QA624_RS06535	-	1052776..1053399 (-)	624	WP_001831016.1	MBL fold metallo-hydrolase	-
QA624_RS06540	-	1053399..1053725 (-)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QA624_RS06545	-	1053725..1054711 (-)	987	WP_001831113.1	ROK family glucokinase	-
QA624_RS06550	-	1054711..1054911 (-)	201	WP_001831138.1	YqgQ family protein	-
QA624_RS06555	-	1054895..1056355 (-)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
QA624_RS06560	-	1056356..1056907 (-)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
QA624_RS06565	rpmG	1057090..1057239 (-)	150	WP_001830957.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37330.44 Da
• Isoelectric Point: 8.8174

>NTDB_id=812756 QA624_RS06530 WP_001831109.1 1051745..1052719(-) (comGA) [Staphylococcus epidermidis strain 1FSE05]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=812756 QA624_RS06530 WP_001831109.1 1051745..1052719(-) (comGA) [Staphylococcus epidermidis strain 1FSE05]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701