Detailed information NTG0812551

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QA608_RS04585
• Genome accession: NZ_CP121502
• Coordinates: 984105..985079 (-)
• Length: 324 a.a.
• NCBI ID: WP_151368235.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain 24FSE01
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 979105..990079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA608_RS04550	gcvT	979623..980714 (-)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-
QA608_RS04555	-	980932..981444 (-)	513	WP_002440040.1	shikimate kinase	-
QA608_RS04560	-	981609..982100 (-)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
QA608_RS04565	-	982024..982317 (-)	294	WP_001831116.1	hypothetical protein	-
QA608_RS04570	comGD	982304..982741 (-)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
QA608_RS04575	comGC	982731..983048 (-)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
QA608_RS04580	comGB	983066..984133 (-)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
QA608_RS04585	comGA	984105..985079 (-)	975	WP_151368235.1	competence type IV pilus ATPase ComGA	Machinery gene
QA608_RS04590	-	985136..985759 (-)	624	WP_278269668.1	MBL fold metallo-hydrolase	-
QA608_RS04595	-	985759..986085 (-)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QA608_RS04600	-	986085..987071 (-)	987	WP_001831113.1	ROK family glucokinase	-
QA608_RS04605	-	987071..987271 (-)	201	WP_001831138.1	YqgQ family protein	-
QA608_RS04610	-	987255..988715 (-)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
QA608_RS04615	-	988716..989267 (-)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
QA608_RS04620	rpmG	989450..989599 (-)	150	WP_001830957.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37356.47 Da
• Isoelectric Point: 8.8079

>NTDB_id=812551 QA608_RS04585 WP_151368235.1 984105..985079(-) (comGA) [Staphylococcus epidermidis strain 24FSE01]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGYLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=812551 QA608_RS04585 WP_151368235.1 984105..985079(-) (comGA) [Staphylococcus epidermidis strain 24FSE01]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGTATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	69.753	100	0.698
comGA	Staphylococcus aureus N315	69.753	100	0.698