Detailed information NTG0812446

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QA590_RS02165
• Genome accession: NZ_CP121483
• Coordinates: 441139..442113 (+)
• Length: 324 a.a.
• NCBI ID: WP_002495041.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain 32FSE07
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 436139..447113

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA590_RS02130	rpmG	436619..436768 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
QA590_RS02135	-	436951..437502 (+)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
QA590_RS02140	-	437503..438963 (+)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
QA590_RS02145	-	438947..439147 (+)	201	WP_001831138.1	YqgQ family protein	-
QA590_RS02150	-	439147..440133 (+)	987	WP_001831113.1	ROK family glucokinase	-
QA590_RS02155	-	440133..440459 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QA590_RS02160	-	440459..441082 (+)	624	WP_001831016.1	MBL fold metallo-hydrolase	-
QA590_RS02165	comGA	441139..442113 (+)	975	WP_002495041.1	competence type IV pilus ATPase ComGA	Machinery gene
QA590_RS02170	comGB	442085..443152 (+)	1068	WP_278269378.1	competence type IV pilus assembly protein ComGB	Machinery gene
QA590_RS02175	comGC	443170..443487 (+)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
QA590_RS02180	comGD	443477..443914 (+)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
QA590_RS02185	-	443901..444194 (+)	294	WP_001831116.1	hypothetical protein	-
QA590_RS02190	-	444118..444609 (+)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
QA590_RS02195	-	444774..445286 (+)	513	WP_002485736.1	shikimate kinase	-
QA590_RS02200	gcvT	445504..446595 (+)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37356.47 Da
• Isoelectric Point: 8.8079

>NTDB_id=812446 QA590_RS02165 WP_002495041.1 441139..442113(+) (comGA) [Staphylococcus epidermidis strain 32FSE07]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQYRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=812446 QA590_RS02165 WP_002495041.1 441139..442113(+) (comGA) [Staphylococcus epidermidis strain 32FSE07]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGTATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701