Detailed information NTG0812448

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RTE58_RS00845
• Genome accession: NZ_CP135959
• Coordinates: 180325..181308 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain MS1266
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 175325..186308

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RTE58_RS00830 (RTE58_00830)	dppA	176469..178076 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
RTE58_RS00835 (RTE58_00835)	dppB	178383..179402 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
RTE58_RS00840 (RTE58_00840)	dppC	179412..180314 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
RTE58_RS00845 (RTE58_00845)	amiE	180325..181308 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
RTE58_RS00850 (RTE58_00850)	dppF	181305..182309 (+)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
RTE58_RS00855 (RTE58_00855)	yhjV	182339..183610 (-)	1272	WP_001334058.1	aromatic amino acid transport family protein	-
RTE58_RS00860 (RTE58_00860)	-	184086..184193 (+)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
RTE58_RS00865 (RTE58_00865)	-	184568..184675 (+)	108	WP_000170747.1	type I toxin-antitoxin system toxin Ldr family protein	-
RTE58_RS00870 (RTE58_00870)	-	185051..185158 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=812448 RTE58_RS00845 WP_001196477.1 180325..181308(+) (amiE) [Escherichia coli strain MS1266]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=812448 RTE58_RS00845 WP_001196477.1 180325..181308(+) (amiE) [Escherichia coli strain MS1266]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404