Detailed information NTG0081244

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: MARGE09_RS09450
• Genome accession: NZ_AP023086
• Coordinates: 2398019..2399398 (-)
• Length: 459 a.a.
• NCBI ID: WP_236987086.1
• Uniprot ID: A0AAN2BK43
• Organism: Marinagarivorans cellulosilyticus strain GE09
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2393019..2404398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MARGE09_RS09445 (MARGE09_P1822)	-	2394141..2397818 (+)	3678	WP_236987085.1	PAS domain S-box protein	-
MARGE09_RS09450 (MARGE09_P1823)	pilR	2398019..2399398 (-)	1380	WP_236987086.1	sigma-54-dependent transcriptional regulator	Regulator
MARGE09_RS09455 (MARGE09_P1824)	-	2399421..2401013 (-)	1593	WP_236987087.1	sensor histidine kinase	-
MARGE09_RS09460 (MARGE09_P1825)	-	2401320..2402945 (+)	1626	WP_236987088.1	NAD+ synthase	-
MARGE09_RS09465 (MARGE09_P1826)	pxpA	2403066..2403779 (-)	714	WP_236987089.1	5-oxoprolinase subunit PxpA	-

Sequence

Protein

• Length: 459 a.a.
• Molecular weight: 51132.54 Da
• Isoelectric Point: 5.3781

>NTDB_id=81244 MARGE09_RS09450 WP_236987086.1 2398019..2399398(-) (pilR) [Marinagarivorans cellulosilyticus strain GE09]
MSELFTALIIDDEPDICELLEMTLNRMGVQCTTANNVLSAKTLLERKAFNICLTDMRLPDGNGIDIVRFIQKHTPQLPVA
VITAHGNMDTAVESLKAGAFDFLSKPIDLANLRTLVKNALASNQLTDDTAPKTQSRLLGESPAIKQLERSIVKLARSQAP
VYITGESGSGKELVARSMHERGPRANSPFLAVNCGAIPRELMESEFFGHKKGSFTGAHQDKQGLFRAAEGGTLFLDEVAD
LPLDMQVKLLRAIQEKAVRAIGGSAEEPFNVRILSATHRNLEAEVAEGNFRQDLFYRLNVIQLNVPPLRDRKDDVALLTH
HLLQKLAADMQLDTPKISPAALNELERYSFPGNVRELENILERAFTLCDTDTIESHDLQLKHDAILTENLPTSSIPVISH
YERALEFPNIDDYLADIEKDIILGSLEKVRWNKTMAAKELGVTFRSLRYRMQKLGLEED

Nucleotide

• Length: 1380 bp

>NTDB_id=81244 MARGE09_RS09450 WP_236987086.1 2398019..2399398(-) (pilR) [Marinagarivorans cellulosilyticus strain GE09]
ATGAGCGAACTTTTTACAGCATTAATTATTGACGACGAACCGGATATTTGTGAATTGCTAGAAATGACATTGAATCGCAT
GGGCGTTCAATGCACGACCGCAAACAATGTCCTTAGCGCTAAAACACTACTCGAACGAAAAGCATTCAATATTTGTTTAA
CCGATATGCGTCTGCCTGATGGTAACGGCATCGATATTGTTCGGTTTATTCAAAAACATACTCCGCAGTTACCTGTTGCC
GTAATTACCGCCCACGGCAATATGGATACTGCCGTTGAGTCGTTAAAAGCTGGAGCCTTTGACTTTTTATCTAAACCCAT
TGACCTTGCCAACTTGCGCACCCTCGTCAAAAATGCTTTAGCCTCCAACCAGCTCACCGACGATACCGCCCCCAAAACAC
AGTCGCGCTTATTAGGCGAATCGCCCGCAATAAAACAACTCGAACGGAGTATTGTTAAATTGGCGCGCTCACAAGCCCCT
GTATATATCACTGGCGAATCTGGCAGCGGTAAAGAGCTTGTTGCCCGCTCCATGCATGAGCGAGGGCCAAGAGCCAATAG
CCCTTTTCTTGCTGTTAACTGTGGCGCAATACCGCGCGAATTAATGGAAAGTGAGTTTTTTGGCCATAAGAAAGGCTCGT
TTACCGGTGCCCACCAAGATAAGCAAGGCTTGTTTCGTGCAGCAGAAGGCGGCACGCTTTTTTTGGATGAAGTCGCAGAC
TTACCGCTCGATATGCAGGTTAAATTACTGCGCGCAATTCAAGAAAAAGCCGTTCGCGCTATCGGGGGTTCCGCCGAAGA
ACCCTTTAACGTTCGCATACTGTCTGCCACCCATCGCAATTTAGAAGCCGAAGTGGCAGAGGGTAATTTCAGACAGGATT
TATTTTATCGACTCAACGTTATTCAACTCAATGTGCCGCCACTGCGCGATCGCAAAGACGATGTAGCGTTGCTAACGCAT
CACCTTCTTCAAAAATTAGCCGCAGACATGCAACTGGATACGCCCAAAATATCACCAGCAGCATTAAACGAGCTTGAACG
CTATAGCTTCCCCGGCAATGTTCGCGAGCTTGAAAACATTCTAGAGCGCGCATTCACCTTGTGCGATACAGACACTATAG
AAAGCCACGATTTACAACTCAAGCACGACGCCATCCTTACCGAAAACTTACCAACCTCCAGCATCCCTGTGATTAGCCAC
TATGAACGCGCGCTGGAATTCCCCAACATTGACGATTATCTCGCCGATATTGAAAAAGATATTATTCTTGGATCACTCGA
AAAAGTGCGATGGAATAAAACAATGGCAGCTAAAGAGCTTGGCGTCACTTTCAGGTCGCTGCGTTATCGCATGCAAAAAC
TAGGTCTTGAAGAAGATTAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (137-303)

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.532	98.257	0.595
pilR	Acinetobacter baumannii strain A118	48.164	100	0.486