Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   P8P68_RS05815 Genome accession   NZ_CP121467
Coordinates   1208227..1209264 (-) Length   345 a.a.
NCBI ID   WP_000730765.1    Uniprot ID   A0AAX3THV2
Organism   Streptococcus sp. D7B5     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1203227..1214264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8P68_RS05790 (P8P68_05790) - 1204121..1205452 (-) 1332 WP_070696073.1 hemolysin family protein -
  P8P68_RS05795 (P8P68_05795) endA 1205588..1206412 (-) 825 WP_000358998.1 DNA/RNA non-specific endonuclease Machinery gene
  P8P68_RS05800 (P8P68_05800) - 1206453..1206647 (-) 195 WP_000739701.1 DNA-directed RNA polymerase subunit beta -
  P8P68_RS05805 (P8P68_05805) murA 1206634..1207917 (-) 1284 WP_278275754.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  P8P68_RS05810 (P8P68_05810) - 1207941..1208171 (-) 231 WP_009013716.1 DUF1146 family protein -
  P8P68_RS05815 (P8P68_05815) sepM 1208227..1209264 (-) 1038 WP_000730765.1 SepM family pheromone-processing serine protease Regulator
  P8P68_RS05820 (P8P68_05820) coaD 1209248..1209736 (-) 489 WP_001280710.1 pantetheine-phosphate adenylyltransferase -
  P8P68_RS05825 (P8P68_05825) rsmD 1209726..1210265 (-) 540 WP_278275755.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  P8P68_RS05830 (P8P68_05830) asnA 1210330..1211322 (-) 993 WP_000747998.1 aspartate--ammonia ligase -
  P8P68_RS05835 (P8P68_05835) - 1211432..1212115 (-) 684 WP_125389242.1 Bax inhibitor-1/YccA family protein -
  P8P68_RS05840 (P8P68_05840) - 1212170..1212910 (-) 741 WP_278275756.1 RNA methyltransferase -
  P8P68_RS05845 (P8P68_05845) - 1212944..1213222 (+) 279 WP_001174609.1 acylphosphatase -
  P8P68_RS05850 (P8P68_05850) yidC 1213300..1214229 (+) 930 WP_049479479.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37553.77 Da        Isoelectric Point: 5.5304

>NTDB_id=812226 P8P68_RS05815 WP_000730765.1 1208227..1209264(-) (sepM) [Streptococcus sp. D7B5]
MKKKTRWPLYVILALILTFLAFVVPLPYYIEVPGGAEDIRRVLKVNETEDTEAGAYQFVTVGIRHATLSHLVYAWLTPFT
DIRSAKETTGGSTDAEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNIADTVTAVNDKTF
DSSKDLVDYVNSQQLGDTVKVTYEEDGKVKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVAASRQGANIFFAPDNPVTEEAKKADPNAKSNYETALEAAK
TIKTEMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=812226 P8P68_RS05815 WP_000730765.1 1208227..1209264(-) (sepM) [Streptococcus sp. D7B5]
ATGAAGAAAAAAACTAGATGGCCCTTATATGTCATCCTAGCACTAATATTGACGTTTTTAGCCTTTGTAGTACCTTTACC
ATACTACATAGAAGTTCCAGGTGGAGCGGAAGATATTCGTCGCGTTTTGAAAGTCAATGAAACAGAAGACACAGAAGCAG
GAGCTTACCAGTTTGTAACAGTCGGTATTCGACACGCAACCCTATCGCATCTTGTCTATGCTTGGTTAACGCCTTTCACA
GATATTAGAAGTGCCAAGGAGACTACGGGTGGCTCTACTGATGCAGAGTTTATGCGGATCAATCAGTTCTACATGCAAAC
TTCTCAAAACATGGCCAAGTATCAAGGATTGAAGACGGCTGGGAAAGATATTGAACTCAAGTATCTGGGAGTTTATGTCT
TGACCGTGACGGACAATTCAACTTTTAAGGGCATTCTGAACATTGCAGATACCGTGACGGCTGTTAATGACAAAACATTT
GACAGTTCAAAAGACTTGGTCGACTATGTCAACTCTCAACAATTAGGAGATACGGTCAAGGTAACCTATGAAGAAGACGG
AAAAGTCAAGTCTGCAGAAGGTAAAATTATCACTCTCGAAAACGGAAAAAACGGGATTGGAATTGGTTTGATTGACCGTA
CGGAAGTGACCAGTGACGTTCCAATTCGCTTTTCAACAGCTGGTATCGGCGGCCCAAGTGCCGGTCTCATGTTTAGTCTC
GCTATTTATACCCAGATAGCAGATCCAGGACTTCGTAATGGCCGCATCGTTGCGGGAACGGGAACTATTGATCGCGATGG
AAATGTTGGCGACATCGGTGGAATTGATAAAAAAGTAGTTGCAGCCTCTCGTCAGGGAGCCAACATCTTTTTTGCTCCTG
ACAATCCAGTCACCGAGGAAGCAAAAAAAGCAGATCCCAATGCGAAAAGCAACTATGAAACAGCCCTAGAAGCTGCTAAA
ACGATCAAAACAGAGATGAAAATCGTTCCCGTTAAGACTTTGCAGGATGCAATTGATTACCTTAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

60.234

99.13

0.597