Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   P8P68_RS05250 Genome accession   NZ_CP121467
Coordinates   1064201..1064932 (-) Length   243 a.a.
NCBI ID   WP_101800368.1    Uniprot ID   -
Organism   Streptococcus sp. D7B5     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1059201..1069932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8P68_RS05220 (P8P68_05220) blpC 1059853..1060008 (+) 156 WP_000360258.1 quorum-sensing system pheromone BlpC -
  P8P68_RS05225 (P8P68_05225) - 1060051..1061391 (-) 1341 WP_221161141.1 sensor histidine kinase -
  P8P68_RS05230 (P8P68_05230) comE/blpR 1061405..1062142 (-) 738 WP_070800389.1 LytTR family DNA-binding domain-containing protein Regulator
  P8P68_RS05235 (P8P68_05235) - 1062147..1062485 (-) 339 WP_247924444.1 LytTR family transcriptional regulator DNA-binding domain-containing protein -
  P8P68_RS05240 (P8P68_05240) - 1062764..1063093 (+) 330 WP_084940459.1 helicase BlpT -
  P8P68_RS05245 (P8P68_05245) - 1063155..1064204 (-) 1050 WP_278275715.1 ABC transporter permease -
  P8P68_RS05250 (P8P68_05250) pptA 1064201..1064932 (-) 732 WP_101800368.1 ABC transporter ATP-binding protein Regulator
  P8P68_RS05255 (P8P68_05255) - 1065000..1065410 (+) 411 WP_125384974.1 HIT family protein -
  P8P68_RS05260 (P8P68_05260) - 1065420..1065698 (+) 279 WP_125384973.1 hypothetical protein -
  P8P68_RS05265 (P8P68_05265) - 1065768..1066421 (+) 654 WP_278275716.1 hypothetical protein -
  P8P68_RS05270 (P8P68_05270) dnaJ 1066501..1067655 (-) 1155 WP_278275717.1 molecular chaperone DnaJ -
  P8P68_RS05275 (P8P68_05275) dnaK 1068017..1069840 (-) 1824 WP_042902036.1 molecular chaperone DnaK -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27186.65 Da        Isoelectric Point: 4.7960

>NTDB_id=812219 P8P68_RS05250 WP_101800368.1 1064201..1064932(-) (pptA) [Streptococcus sp. D7B5]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLREDATNYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVESLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGNLQQLRDAFAMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=812219 P8P68_RS05250 WP_101800368.1 1064201..1064932(-) (pptA) [Streptococcus sp. D7B5]
ATGTTAGAAATTAAAAACCTGACAGGAGGCTATGTTCACGTCCCTGTCTTGAAAGATGTGTCCTTTACCGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGGCTCAACGGTGCTGGGAAATCAACGACAATCAATGAGATTATTGGTCTGTTGACACCTT
ACAGTGGGGAAATCAAGATTAACGGTCTCACCCTGCGAGAAGATGCGACCAACTATCGCAAGCAGATTGGCTATATCCCA
GAAACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAGACGGTTGCCATGGCCTATGGTATTGAGCAAAA
AGTGGCTTTTGAGCGAGTAGAATCTTTGTTAAAAATGTTTCGTTTGGATCAAAAATTAGACTGGTTCCCAGTGCATTTTT
CCAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTGTCGTAGATCCGAGTCTTTTCATCGTTGATGAGCCTTTC
CTTGGGCTCGATCCTTTGGCCATTTCTGACTTGATCCAGCTTTTGGAAGTGGAAAAGCAAAAAGGCAAGTCCATTCTCAT
GAGTACCCACGTGCTAGACTCAGCGGAAAAGATGTGTGATGCCTTTGTCATTCTCCACAAGGGGGAGGTGCGGGCTCAGG
GGAACCTCCAGCAACTGCGGGATGCTTTTGCCATGCCTGAAGCGAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712