Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   P8P68_RS01605 Genome accession   NZ_CP121467
Coordinates   331847..333649 (+) Length   600 a.a.
NCBI ID   WP_278276036.1    Uniprot ID   A0AAX3TLZ1
Organism   Streptococcus sp. D7B5     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 326847..338649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8P68_RS01585 (P8P68_01585) smpB 328130..328597 (+) 468 WP_001051743.1 SsrA-binding protein SmpB -
  P8P68_RS01590 (P8P68_01590) tehB 328612..329472 (+) 861 WP_278276033.1 SAM-dependent methyltransferase TehB -
  P8P68_RS01595 (P8P68_01595) - 329647..330795 (+) 1149 WP_278276034.1 hypothetical protein -
  P8P68_RS01600 (P8P68_01600) coiA 330872..331828 (+) 957 WP_278276035.1 competence protein CoiA family protein Machinery gene
  P8P68_RS01605 (P8P68_01605) pepF 331847..333649 (+) 1803 WP_278276036.1 oligoendopeptidase F Regulator
  P8P68_RS01610 (P8P68_01610) - 333651..334364 (+) 714 WP_278276038.1 O-methyltransferase -
  P8P68_RS01615 (P8P68_01615) prsA 334432..335373 (+) 942 WP_000728082.1 peptidylprolyl isomerase PrsA -
  P8P68_RS01620 (P8P68_01620) - 335562..336785 (+) 1224 WP_125825847.1 FtsW/RodA/SpoVE family cell cycle protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69830.73 Da        Isoelectric Point: 4.6205

>NTDB_id=812203 P8P68_RS01605 WP_278276036.1 331847..333649(+) (pepF) [Streptococcus sp. D7B5]
MVLQRHEINEKDTWDLSTIYPTDQAWEEALKDLTEKVQTASRYEGHLLDSADSLLEITEFSLDLERQVEKLYVYAHMKND
QDTREAKYQEYYAKAMTLYSQLEQAFSFYEPEFMEISEEQYAAFLEAQPKLQVYKHFFDKLLQKKDHVLSQREEELLAGA
GEIFGAASETFAILDNADISFPYVFDDEGNEVQLSHGTYIRLMESKNREVRRGAYEALYATYEQFQHTYAKTLQTNVKVQ
NYRAKVRNYKSARHAALAANFVPESVYDNLVAAVRKHLPLLHRYLNLRSKILGISDLKMYDVYTPLSSVEYSFTYEEALK
KAEEALAVLGDDYLSRVKRAFSERWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDNLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVEDDATRFAILNNFLDGFRGTVFRQTQFAEFEHAIHQADQNGEVLTSDF
LNKLYADLNQEYYGLSKEDNPQIQYEWARIPHFYYNYYVYQYSTGFAAASALAEKIVHGSQEDRDRYIDYLKAGKSDYPL
NVMRKAGVDMEKEDYLNDAFAVFERRLNEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=812203 P8P68_RS01605 WP_278276036.1 331847..333649(+) (pepF) [Streptococcus sp. D7B5]
ATGGTATTACAACGACATGAAATAAATGAAAAAGATACATGGGATCTTTCAACAATCTACCCAACAGACCAGGCTTGGGA
AGAAGCCTTGAAAGATTTAACTGAAAAAGTACAAACAGCATCTCGATATGAGGGGCATCTCTTGGATAGCGCAGACAGTT
TGCTTGAGATTACAGAATTCTCACTTGACTTGGAACGCCAAGTTGAAAAGCTTTATGTCTATGCGCATATGAAAAATGAC
CAGGACACACGTGAAGCCAAGTATCAAGAGTACTATGCTAAGGCAATGACCCTATACAGTCAGTTAGAACAAGCCTTTTC
ATTCTATGAACCTGAGTTTATGGAGATTAGTGAGGAGCAGTATGCGGCCTTCCTAGAAGCTCAACCAAAACTCCAAGTTT
ACAAGCACTTTTTTGACAAGCTCTTGCAAAAAAAAGACCATGTTCTTTCGCAACGTGAGGAAGAATTGCTTGCTGGCGCA
GGAGAAATCTTTGGCGCTGCTAGTGAAACCTTCGCTATTTTGGACAATGCGGATATTAGCTTCCCATATGTCTTTGATGA
TGAAGGCAATGAAGTGCAACTCTCACACGGTACTTACATTCGCTTGATGGAGTCTAAAAACCGTGAAGTGCGTCGTGGGG
CCTATGAAGCCCTTTATGCGACTTACGAGCAATTCCAACACACTTATGCTAAGACTTTGCAGACAAATGTCAAGGTGCAA
AACTACCGTGCAAAAGTCCGCAACTATAAGAGTGCTCGCCATGCAGCCCTCGCAGCAAACTTTGTTCCAGAAAGTGTCTA
TGACAATCTAGTAGCAGCAGTTCGCAAGCATTTGCCACTCTTGCATCGATACCTTAACCTGCGTTCTAAAATCTTGGGTA
TTTCAGATCTCAAGATGTACGATGTCTACACACCGCTATCTTCAGTAGAATACAGCTTTACCTACGAAGAAGCCTTGAAA
AAGGCAGAAGAGGCCTTGGCAGTCTTGGGTGACGACTACTTGAGCCGTGTCAAACGTGCCTTCAGCGAGCGTTGGATTGA
TGTCTATGAAAACCAAGGCAAGCGTTCTGGTGCCTACTCTGGTGGTTCTTATGATACCAATGCCTTTATGCTTCTCAACT
GGCAGGACAATTTAGACAATCTCTTTACCCTTGTCCATGAAACTGGTCACAGTATGCACTCCAGCTATACTCGTGAAACC
CAACCTTATGTGTACGGAGATTACTCAATCTTCTTGGCAGAAATTGCCTCAACGACCAATGAAAATATCTTGACAGAGAA
ATTATTGGAAGAAGTGGAAGACGATGCAACTCGCTTTGCAATCCTCAATAACTTCTTGGACGGTTTCCGTGGAACAGTTT
TCCGTCAAACTCAATTCGCTGAGTTTGAACATGCCATCCATCAAGCAGATCAAAATGGAGAAGTCTTGACCAGTGATTTC
CTCAATAAGCTCTACGCGGACTTGAACCAAGAGTACTATGGACTCAGCAAGGAAGACAATCCTCAGATCCAATACGAGTG
GGCACGCATTCCACACTTCTACTATAACTACTATGTTTATCAGTATTCAACAGGTTTTGCAGCTGCTTCAGCCTTGGCTG
AGAAGATTGTCCATGGTAGTCAAGAAGATCGTGACCGCTATATCGACTACCTCAAGGCAGGTAAGTCTGACTATCCACTC
AATGTCATGAGAAAAGCGGGAGTGGATATGGAGAAGGAAGACTATCTCAACGATGCCTTTGCAGTCTTTGAACGTCGCTT
GAACGAGTTTGAAGCCCTTGTTGAAAAATTGGGACTAGCTTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

67.617

99.333

0.672