Detailed information NTG0812187

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: P9972_RS17140
• Genome accession: NZ_CP121465
• Coordinates: 3456341..3457504 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain YA215
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3451341..3462504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P9972_RS17110 (P9972_17110)	-	3451606..3452025 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
P9972_RS17115 (P9972_17115)	comFC	3452099..3452788 (-)	690	WP_197080391.1	phosphoribosyltransferase family protein	Machinery gene
P9972_RS17120 (P9972_17120)	-	3452794..3453078 (-)	285	WP_003151389.1	competence protein ComFB	-
P9972_RS17125 (P9972_17125)	comFA	3453136..3454521 (-)	1386	WP_046560106.1	DEAD/DEAH box helicase	Machinery gene
P9972_RS17130 (P9972_17130)	-	3454629..3455477 (-)	849	WP_044052857.1	DegV family protein	-
P9972_RS17135 (P9972_17135)	degU	3455575..3456264 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
P9972_RS17140 (P9972_17140)	degS	3456341..3457504 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
P9972_RS17145 (P9972_17145)	-	3457726..3458373 (+)	648	WP_003151384.1	YigZ family protein	-
P9972_RS17150 (P9972_17150)	-	3458378..3459592 (+)	1215	WP_003151383.1	LCP family protein	-
P9972_RS17155 (P9972_17155)	-	3459682..3460758 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
P9972_RS17160 (P9972_17160)	-	3460891..3462087 (-)	1197	WP_079004918.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=812187 P9972_RS17140 WP_003151385.1 3456341..3457504(-) (degS) [Bacillus velezensis strain YA215]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=812187 P9972_RS17140 WP_003151385.1 3456341..3457504(-) (degS) [Bacillus velezensis strain YA215]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGTTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948