Detailed information NTG0811099

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: P7Y79_RS03930
• Genome accession: NZ_CP121207
• Coordinates: 816134..817363 (+)
• Length: 409 a.a.
• NCBI ID: WP_074560306.1
• Uniprot ID: A0A1H0YH95
• Organism: Streptococcus ruminicola strain CNU_77-47
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 811134..822363

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P7Y79_RS03910 (P7Y79_03910)	-	811721..812995 (-)	1275	WP_278007773.1	hydroxymethylglutaryl-CoA reductase, degradative	-
P7Y79_RS03915 (P7Y79_03915)	-	812982..814160 (-)	1179	WP_278007774.1	hydroxymethylglutaryl-CoA synthase	-
P7Y79_RS03920 (P7Y79_03920)	-	814489..815328 (+)	840	WP_157629095.1	thymidylate synthase	-
P7Y79_RS03925 (P7Y79_03925)	-	815411..815905 (+)	495	WP_074560308.1	dihydrofolate reductase	-
P7Y79_RS03930 (P7Y79_03930)	clpX	816134..817363 (+)	1230	WP_074560306.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
P7Y79_RS03935 (P7Y79_03935)	yihA	817374..817967 (+)	594	WP_074560304.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
P7Y79_RS03940 (P7Y79_03940)	-	818104..819480 (+)	1377	WP_278007775.1	amino acid permease	-
P7Y79_RS03945 (P7Y79_03945)	mmuM	819491..820435 (+)	945	WP_278007776.1	homocysteine S-methyltransferase	-
P7Y79_RS03950 (P7Y79_03950)	-	820467..821135 (-)	669	WP_278007836.1	YoaK family protein	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45254.78 Da
• Isoelectric Point: 4.4880

>NTDB_id=811099 P7Y79_RS03930 WP_074560306.1 816134..817363(+) (clpX) [Streptococcus ruminicola strain CNU_77-47]
MVGNRTNDVKVYCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLAEVPKPKELLATLDEYVVGQER
AKRALAVAVYNHYKRVSFAESRDEEDVELQKSNILLIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADFNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQINTK
NILFIVGGAFDGIEDIVKQRLGEKVIGFGQNNRKIDEDASYMQEIISEDIQKFGLIPEFIGRLPVVAALEQLTTDDLVRI
LTEPRNALVKQYQTLLSYDGVELEFDEDALQAIANKAIERKTGARGLRSIIEETMMDIMFEIPSREEVTKVRITKDAVEG
KDKPILEIA

Nucleotide

• Length: 1230 bp

>NTDB_id=811099 P7Y79_RS03930 WP_074560306.1 816134..817363(+) (clpX) [Streptococcus ruminicola strain CNU_77-47]
ATGGTTGGAAATCGAACAAATGATGTAAAAGTTTATTGCTCATTTTGTGGAAAAAGCCAAGACGAAGTAAAAAAAATCAT
TGCCGGAAATAACGTATTTATCTGTAATGAATGTGTGGCTTTATCCCAAGAGATTATTAAAGAGGAGTTAGCAGAAGAAG
TTCTCGCAGATTTGGCTGAAGTTCCAAAACCAAAAGAATTATTAGCAACCCTCGATGAATATGTTGTCGGTCAAGAACGC
GCTAAACGTGCCCTCGCAGTGGCTGTATACAACCACTACAAACGTGTTTCTTTTGCCGAAAGTCGTGATGAAGAAGATGT
TGAATTGCAAAAATCTAACATCTTATTGATTGGACCAACTGGTTCAGGGAAAACGTTCCTTGCTCAAACCTTGGCGAAAA
GTTTAAACGTTCCGTTTGCGATTGCTGATGCGACATCATTGACAGAAGCAGGATACGTTGGTGAAGACGTTGAAAATATC
CTTTTGAAACTCATCCAAGCAGCTGATTTTAATATTGAACGCGCAGAACGTGGTATCATCTACGTGGATGAAATTGATAA
AATTGCCAAAAAAGGCGAAAATGTCTCAATCACTCGTGATGTTTCAGGTGAAGGTGTTCAACAAGCTCTCCTTAAAATTA
TCGAAGGAACAGTTGCTAGCGTGCCACCACAAGGTGGTCGTAAACACCCTAACCAAGAAATGATTCAAATCAATACTAAG
AATATTCTTTTCATCGTTGGTGGTGCCTTTGACGGTATCGAAGATATTGTTAAACAACGTCTCGGTGAAAAAGTTATTGG
TTTTGGTCAAAATAACCGTAAGATCGATGAAGATGCTTCTTATATGCAAGAAATTATCTCCGAAGATATTCAGAAATTTG
GTTTGATTCCTGAATTTATCGGACGCTTGCCAGTCGTTGCTGCGCTTGAACAATTGACAACAGATGATTTGGTGCGAATC
TTGACAGAACCTCGTAATGCTTTGGTTAAACAATACCAAACACTTCTATCATATGATGGTGTTGAGTTGGAATTTGATGA
AGACGCCCTTCAAGCTATTGCTAATAAGGCTATCGAACGTAAGACAGGTGCACGTGGACTTCGTTCAATCATTGAAGAAA
CAATGATGGATATCATGTTTGAAATTCCAAGTCGTGAAGAAGTCACTAAAGTCCGTATCACAAAAGATGCTGTTGAAGGC
AAAGATAAACCAATTTTAGAGATTGCATAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

3D structure

• AlphaFold DB: A0A1H0YH95

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	89.242	100	0.892
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.853	98.044	0.577