Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | P7Y79_RS00500 | Genome accession | NZ_CP121207 |
| Coordinates | 111328..113769 (+) | Length | 813 a.a. |
| NCBI ID | WP_278007526.1 | Uniprot ID | - |
| Organism | Streptococcus ruminicola strain CNU_77-47 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 106328..118769
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P7Y79_RS00480 (P7Y79_00480) | rpsB | 108137..108904 (+) | 768 | WP_021143273.1 | 30S ribosomal protein S2 | - |
| P7Y79_RS00485 (P7Y79_00485) | tsf | 109011..110048 (+) | 1038 | WP_074869514.1 | translation elongation factor Ts | - |
| P7Y79_RS00490 (P7Y79_00490) | - | 110148..110612 (-) | 465 | WP_074560991.1 | small multi-drug export protein | - |
| P7Y79_RS00495 (P7Y79_00495) | - | 110870..111331 (+) | 462 | WP_166043492.1 | CtsR family transcriptional regulator | - |
| P7Y79_RS00500 (P7Y79_00500) | clpC | 111328..113769 (+) | 2442 | WP_278007526.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| P7Y79_RS00505 (P7Y79_00505) | - | 113826..114185 (-) | 360 | WP_166043488.1 | hypothetical protein | - |
| P7Y79_RS00510 (P7Y79_00510) | - | 114371..114703 (+) | 333 | WP_166043486.1 | LytTR family transcriptional regulator DNA-binding domain-containing protein | - |
| P7Y79_RS00515 (P7Y79_00515) | comE/blpR | 114713..115447 (+) | 735 | WP_133017806.1 | response regulator transcription factor | Regulator |
| P7Y79_RS00520 (P7Y79_00520) | - | 115451..116809 (+) | 1359 | WP_278007527.1 | GHKL domain-containing protein | - |
| P7Y79_RS00525 (P7Y79_00525) | - | 116954..117700 (+) | 747 | WP_157629448.1 | hypothetical protein | - |
| P7Y79_RS00530 (P7Y79_00530) | - | 117728..118600 (+) | 873 | WP_278007528.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90050.50 Da Isoelectric Point: 6.4774
>NTDB_id=811072 P7Y79_RS00500 WP_278007526.1 111328..113769(+) (clpC) [Streptococcus ruminicola strain CNU_77-47]
MSEYSMKMQEVFSIAQYQAARFESPYLESWHVLLAMVAVHDSVAGLTFAEYQNKIAYEEYEAAAVLALGKSPLADVKNVQ
FLEQSKALKDVLTFAESICKVTGSTEVGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDSARLLDLRKSLSRNAGFTKE
KIKAIHDLRKPKKATMGGAFSEMMKPQSTAGELSDFTRDLTELARQGKLEPVIGREKEVSRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVNGEIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEADGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHIEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYETFHNVTISDQ
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKETPSDLTPADQAILEGDFKKATKLLKASRKAVTRKPTAVTE
DDIMATLSRLSGIPVEKMTQADSKKYLTLEKELHKRVIGQDAAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDMAHDYDAMQKRIMEELKKTYRPEFINRIDEKVVFHH
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEAGYDPEMGARPLRRTLQDKVEDKLSELILSGELASGNTLK
IGVSKGQLKFDIA
MSEYSMKMQEVFSIAQYQAARFESPYLESWHVLLAMVAVHDSVAGLTFAEYQNKIAYEEYEAAAVLALGKSPLADVKNVQ
FLEQSKALKDVLTFAESICKVTGSTEVGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDSARLLDLRKSLSRNAGFTKE
KIKAIHDLRKPKKATMGGAFSEMMKPQSTAGELSDFTRDLTELARQGKLEPVIGREKEVSRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVNGEIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEADGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHIEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYETFHNVTISDQ
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKETPSDLTPADQAILEGDFKKATKLLKASRKAVTRKPTAVTE
DDIMATLSRLSGIPVEKMTQADSKKYLTLEKELHKRVIGQDAAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDMAHDYDAMQKRIMEELKKTYRPEFINRIDEKVVFHH
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEAGYDPEMGARPLRRTLQDKVEDKLSELILSGELASGNTLK
IGVSKGQLKFDIA
Nucleotide
Download Length: 2442 bp
>NTDB_id=811072 P7Y79_RS00500 WP_278007526.1 111328..113769(+) (clpC) [Streptococcus ruminicola strain CNU_77-47]
ATGAGTGAATATTCAATGAAAATGCAGGAGGTTTTCAGTATCGCCCAGTACCAAGCGGCGCGATTTGAAAGCCCATATTT
AGAAAGTTGGCATGTGCTTTTAGCCATGGTAGCTGTTCATGATTCAGTGGCAGGGTTAACATTTGCTGAATACCAAAATA
AGATTGCTTACGAAGAGTACGAAGCGGCAGCTGTTTTGGCGCTCGGGAAATCACCTTTGGCAGATGTTAAAAATGTGCAG
TTCTTAGAACAATCTAAAGCCCTAAAAGACGTCTTAACTTTTGCTGAGTCAATTTGCAAAGTGACTGGAAGCACTGAAGT
CGGAACAGAGCATGTCCTTTATGCTATGTTGTTGAATCTCGATTTGTTTGCGACACGTCTTTTGGAAGTTGCTGGATTTA
AAAATAAAGAAGATGGTGATTCAGCACGCTTGCTTGATTTGCGTAAATCATTGTCACGTAATGCTGGATTTACTAAAGAA
AAAATCAAAGCTATTCACGATCTTCGCAAACCCAAAAAAGCTACAATGGGCGGAGCTTTCTCAGAAATGATGAAACCTCA
GTCAACTGCGGGAGAATTATCAGACTTCACTCGTGATTTAACTGAATTAGCTCGTCAAGGAAAACTTGAGCCAGTTATCG
GACGTGAAAAAGAAGTCTCTCGCATGGTTCAAGTACTTAGCCGTAAGACTAAAAATAATCCTGTCTTGGTCGGTGAAGCT
GGTGTTGGTAAAACAGCTCTTGCTTATGGTTTGGCACAACGTATTGTTAATGGTGAAATTCCTTATGAGCTTCAAGACAT
GCGTGTCTTAGAGCTTGATATGATGAGTGTTGTTGCGGGAACTCGTTTCCGTGGTGATTTCGAAGAACGCATGAACCAAA
TCATCTCAGACATTGAAGCTGATGGTCATATTATTTTATTCATCGATGAAGTGCACACTATTATGGGATCTGGTTCTGGA
ATTGATAGTACTTTAGATGCTGCTAATATCTTAAAACCTGCTCTTGCACGTGGTACGCTTCACATGGTTGGTGCGACAAC
TCAAGAAGAATATCAAAAACATATCGAAAAAGATGCAGCTCTTTCACGTCGTTTTGCGAAAATTACGATTGAAGAACCAA
GTGTTGAAGATGCTTATCAAATTTTACTTGGGCTTAAGAAATCTTACGAAACTTTCCATAATGTGACGATTTCTGATCAA
GCTGTGTTGACGGCTGTTAAAGCTGCACACCGTTATTTGACAAGTAAAAATCTACCAGACTCAGCTATTGATTTGCTTGA
TGAAGCTAGTGCAACCGTTCAAGGTTTGGTGAAAAAAGAAACACCTTCTGACTTAACTCCAGCTGACCAAGCTATCTTAG
AAGGTGATTTCAAAAAAGCTACAAAATTGCTAAAAGCATCACGTAAAGCTGTGACACGTAAGCCAACAGCTGTGACAGAA
GATGACATTATGGCAACTCTTAGTCGCTTGTCAGGTATTCCAGTTGAAAAAATGACGCAAGCCGACAGCAAGAAATATTT
GACGCTTGAAAAAGAATTGCACAAACGTGTGATTGGTCAAGATGCTGCTATTTCAGCGATTAGCCGAGCAATCCGTCGTA
ATCAAGCAGGTATCCGTACAGGAAAACGTCCAATTGGGTCATTCATGTTCTTGGGACCTACTGGTGTTGGTAAGACTGAA
TTAGCTAAAGCTTTGGCTGAACTTCTCTTTGATGATGAATCAGCACTTATCCGCTTTGACATGTCTGAATACATGGAAAA
ATTTGCGGCTAGTCGTCTTAACGGAGCTCCTCCAGGATACGTTGGTTATGAAGAAGGTGGCGAATTGACTGAAAAAGTTC
GTAACAAACCTTATTCAGTCCTTCTTTTCGATGAAGTTGAAAAAGCTCATCCAGATATTTTCAACGTCCTTCTTCAAGTT
TTGGATGATGGTGTGTTGACAGATAGTCGTGGTCGTAAAGTTGATTTCTCAAATACGATTATTATCATGACGTCAAACCT
TGGTGCGACAGCTCTTCGTGATGATAAAACTGTTGGATTTGGTGCGCGTGATATGGCTCATGATTATGATGCTATGCAAA
AACGTATCATGGAAGAGCTTAAGAAAACTTATCGTCCAGAATTCATCAACCGTATTGATGAAAAGGTTGTCTTCCACCAC
TTAACACAAGAAAATATGCGTGACGTGGTTAAAATCATGGTTAAACCATTGATTGCAACCTTAGCTGAAAAAGATATTAC
GCTTAAATTCCAACCATCAGCGCTTAAATACCTTGCTGAAGCTGGATACGACCCAGAAATGGGTGCTCGTCCTCTTCGCC
GTACCCTACAAGATAAAGTCGAAGATAAATTATCAGAACTTATTCTATCAGGCGAATTAGCAAGTGGAAATACCCTTAAA
ATTGGTGTTTCAAAAGGACAACTTAAATTTGACATTGCTTAA
ATGAGTGAATATTCAATGAAAATGCAGGAGGTTTTCAGTATCGCCCAGTACCAAGCGGCGCGATTTGAAAGCCCATATTT
AGAAAGTTGGCATGTGCTTTTAGCCATGGTAGCTGTTCATGATTCAGTGGCAGGGTTAACATTTGCTGAATACCAAAATA
AGATTGCTTACGAAGAGTACGAAGCGGCAGCTGTTTTGGCGCTCGGGAAATCACCTTTGGCAGATGTTAAAAATGTGCAG
TTCTTAGAACAATCTAAAGCCCTAAAAGACGTCTTAACTTTTGCTGAGTCAATTTGCAAAGTGACTGGAAGCACTGAAGT
CGGAACAGAGCATGTCCTTTATGCTATGTTGTTGAATCTCGATTTGTTTGCGACACGTCTTTTGGAAGTTGCTGGATTTA
AAAATAAAGAAGATGGTGATTCAGCACGCTTGCTTGATTTGCGTAAATCATTGTCACGTAATGCTGGATTTACTAAAGAA
AAAATCAAAGCTATTCACGATCTTCGCAAACCCAAAAAAGCTACAATGGGCGGAGCTTTCTCAGAAATGATGAAACCTCA
GTCAACTGCGGGAGAATTATCAGACTTCACTCGTGATTTAACTGAATTAGCTCGTCAAGGAAAACTTGAGCCAGTTATCG
GACGTGAAAAAGAAGTCTCTCGCATGGTTCAAGTACTTAGCCGTAAGACTAAAAATAATCCTGTCTTGGTCGGTGAAGCT
GGTGTTGGTAAAACAGCTCTTGCTTATGGTTTGGCACAACGTATTGTTAATGGTGAAATTCCTTATGAGCTTCAAGACAT
GCGTGTCTTAGAGCTTGATATGATGAGTGTTGTTGCGGGAACTCGTTTCCGTGGTGATTTCGAAGAACGCATGAACCAAA
TCATCTCAGACATTGAAGCTGATGGTCATATTATTTTATTCATCGATGAAGTGCACACTATTATGGGATCTGGTTCTGGA
ATTGATAGTACTTTAGATGCTGCTAATATCTTAAAACCTGCTCTTGCACGTGGTACGCTTCACATGGTTGGTGCGACAAC
TCAAGAAGAATATCAAAAACATATCGAAAAAGATGCAGCTCTTTCACGTCGTTTTGCGAAAATTACGATTGAAGAACCAA
GTGTTGAAGATGCTTATCAAATTTTACTTGGGCTTAAGAAATCTTACGAAACTTTCCATAATGTGACGATTTCTGATCAA
GCTGTGTTGACGGCTGTTAAAGCTGCACACCGTTATTTGACAAGTAAAAATCTACCAGACTCAGCTATTGATTTGCTTGA
TGAAGCTAGTGCAACCGTTCAAGGTTTGGTGAAAAAAGAAACACCTTCTGACTTAACTCCAGCTGACCAAGCTATCTTAG
AAGGTGATTTCAAAAAAGCTACAAAATTGCTAAAAGCATCACGTAAAGCTGTGACACGTAAGCCAACAGCTGTGACAGAA
GATGACATTATGGCAACTCTTAGTCGCTTGTCAGGTATTCCAGTTGAAAAAATGACGCAAGCCGACAGCAAGAAATATTT
GACGCTTGAAAAAGAATTGCACAAACGTGTGATTGGTCAAGATGCTGCTATTTCAGCGATTAGCCGAGCAATCCGTCGTA
ATCAAGCAGGTATCCGTACAGGAAAACGTCCAATTGGGTCATTCATGTTCTTGGGACCTACTGGTGTTGGTAAGACTGAA
TTAGCTAAAGCTTTGGCTGAACTTCTCTTTGATGATGAATCAGCACTTATCCGCTTTGACATGTCTGAATACATGGAAAA
ATTTGCGGCTAGTCGTCTTAACGGAGCTCCTCCAGGATACGTTGGTTATGAAGAAGGTGGCGAATTGACTGAAAAAGTTC
GTAACAAACCTTATTCAGTCCTTCTTTTCGATGAAGTTGAAAAAGCTCATCCAGATATTTTCAACGTCCTTCTTCAAGTT
TTGGATGATGGTGTGTTGACAGATAGTCGTGGTCGTAAAGTTGATTTCTCAAATACGATTATTATCATGACGTCAAACCT
TGGTGCGACAGCTCTTCGTGATGATAAAACTGTTGGATTTGGTGCGCGTGATATGGCTCATGATTATGATGCTATGCAAA
AACGTATCATGGAAGAGCTTAAGAAAACTTATCGTCCAGAATTCATCAACCGTATTGATGAAAAGGTTGTCTTCCACCAC
TTAACACAAGAAAATATGCGTGACGTGGTTAAAATCATGGTTAAACCATTGATTGCAACCTTAGCTGAAAAAGATATTAC
GCTTAAATTCCAACCATCAGCGCTTAAATACCTTGCTGAAGCTGGATACGACCCAGAAATGGGTGCTCGTCCTCTTCGCC
GTACCCTACAAGATAAAGTCGAAGATAAATTATCAGAACTTATTCTATCAGGCGAATTAGCAAGTGGAAATACCCTTAAA
ATTGGTGTTTCAAAAGGACAACTTAAATTTGACATTGCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
77.34 |
99.877 |
0.772 |
| clpC | Streptococcus thermophilus LMG 18311 |
74.356 |
100 |
0.745 |
| clpC | Streptococcus thermophilus LMD-9 |
74.356 |
100 |
0.745 |
| clpC | Streptococcus pneumoniae TIGR4 |
67.857 |
99.877 |
0.678 |
| clpC | Streptococcus pneumoniae Rx1 |
67.857 |
99.877 |
0.678 |
| clpC | Streptococcus pneumoniae D39 |
67.857 |
99.877 |
0.678 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.94 |
100 |
0.512 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.803 |
100 |
0.448 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.106 |
78.967 |
0.364 |
| clpE | Streptococcus pneumoniae Rx1 |
46.106 |
78.967 |
0.364 |
| clpE | Streptococcus pneumoniae D39 |
46.106 |
78.967 |
0.364 |
| clpE | Streptococcus pneumoniae R6 |
46.106 |
78.967 |
0.364 |