Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   P7Y79_RS00020 Genome accession   NZ_CP121207
Coordinates   3407..4189 (-) Length   260 a.a.
NCBI ID   WP_278007482.1    Uniprot ID   -
Organism   Streptococcus ruminicola strain CNU_77-47     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1..9189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7Y79_RS00010 (P7Y79_00010) dnaN 553..1689 (-) 1137 WP_039696079.1 DNA polymerase III subunit beta -
  P7Y79_RS00015 (P7Y79_00015) dnaA 1848..3203 (-) 1356 WP_278007481.1 chromosomal replication initiator protein DnaA -
  P7Y79_RS00020 (P7Y79_00020) spo0J 3407..4189 (-) 783 WP_278007482.1 ParB/RepB/Spo0J family partition protein Regulator
  P7Y79_RS00025 (P7Y79_00025) htrA 4256..5512 (-) 1257 WP_278007483.1 trypsin-like peptidase domain-containing protein Regulator
  P7Y79_RS00030 (P7Y79_00030) rlmH 5728..6207 (+) 480 WP_039696083.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29768.53 Da        Isoelectric Point: 9.6238

>NTDB_id=811067 P7Y79_RS00020 WP_278007482.1 3407..4189(-) (spo0J) [Streptococcus ruminicola strain CNU_77-47]
MIETLNLIPIDDIAPNPYQPRLKFKPEELEELSRSIKANGLIQPIIVRKSDIFGYELIAGERRLKASKMAGLSEIPAIIK
DITNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDKNQMTHEELAQFMGKSRPYITNCLRLLNLPANISHAVEKGELSQG
HARVLLTLKDEKEQEKWYQKILSEDMSVRKLEQAVKSTKKKKTSSKVSKKDIFIRHQEEELSKLLGLPVTLSLSKSGFKG
DLQLHFQSEEDLNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=811067 P7Y79_RS00020 WP_278007482.1 3407..4189(-) (spo0J) [Streptococcus ruminicola strain CNU_77-47]
ATGATTGAAACACTTAATCTCATACCTATTGACGATATTGCACCAAATCCTTATCAACCTCGCTTAAAATTTAAGCCAGA
AGAATTAGAAGAACTTTCTCGCTCAATAAAGGCAAACGGCCTCATACAGCCGATAATCGTCCGTAAATCAGATATTTTTG
GTTACGAGCTCATTGCAGGCGAAAGACGTCTTAAAGCATCAAAAATGGCTGGTTTAAGCGAAATTCCTGCAATTATAAAA
GATATTACTAATAAAGAAAGCATGCAGCTTGCTATTGTCGAAAATTTGCAGCGCTCTGACCTCAATCCTATTGAAGAAGC
CAAGGCTTATCAGCAATTGCTCGATAAAAACCAAATGACCCATGAAGAATTAGCACAATTTATGGGAAAATCACGACCAT
ATATCACTAATTGCTTGCGCTTATTGAATTTACCTGCCAATATTTCTCACGCTGTCGAGAAAGGTGAACTTTCTCAAGGA
CACGCGCGTGTGCTGCTGACACTTAAGGACGAAAAAGAGCAGGAGAAGTGGTACCAAAAAATTCTGAGCGAGGATATGAG
CGTTCGCAAACTCGAACAAGCTGTAAAATCTACTAAAAAGAAAAAAACATCTTCTAAAGTAAGCAAAAAAGATATTTTTA
TCCGTCATCAAGAAGAAGAATTATCAAAATTATTAGGTCTCCCTGTCACCTTATCACTTTCTAAAAGTGGCTTTAAAGGA
GACTTACAATTACATTTTCAATCAGAAGAAGACTTAAACAGAATTATCAACAGGCTAAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.538

100

0.615