Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | HT081_RS08895 | Genome accession | NZ_AP023073 |
| Coordinates | 1709769..1710164 (-) | Length | 131 a.a. |
| NCBI ID | WP_003703428.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain TUM15753 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1704769..1715164
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HT081_RS08855 (TUM15753C_17280) | - | 1705072..1705317 (-) | 246 | WP_003689849.1 | hypothetical protein | - |
| HT081_RS08860 (TUM15753C_17290) | - | 1705429..1705857 (+) | 429 | WP_020997399.1 | CopD family protein | - |
| HT081_RS08865 (TUM15753C_17300) | - | 1705869..1706345 (+) | 477 | WP_003689851.1 | CYTH domain-containing protein | - |
| HT081_RS08870 (TUM15753C_17310) | - | 1706375..1706863 (-) | 489 | WP_172760411.1 | dihydrofolate reductase | - |
| HT081_RS08875 (TUM15753C_17320) | aroG | 1706931..1707986 (-) | 1056 | WP_003701675.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| HT081_RS08880 | - | 1708148..1708375 (-) | 228 | WP_153707886.1 | hypothetical protein | - |
| HT081_RS08885 (TUM15753C_17330) | - | 1708603..1708899 (+) | 297 | WP_003689859.1 | hypothetical protein | - |
| HT081_RS08890 (TUM15753C_17340) | - | 1708896..1709135 (+) | 240 | WP_010359213.1 | membrane protein | - |
| HT081_RS12425 | - | 1709688..1709835 (+) | 148 | Protein_1736 | peptidase | - |
| HT081_RS08895 (TUM15753C_17350) | comE | 1709769..1710164 (-) | 396 | WP_003703428.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| HT081_RS12140 | - | 1710266..1710385 (-) | 120 | Protein_1738 | competence protein ComE | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13796.61 Da Isoelectric Point: 10.8790
>NTDB_id=81094 HT081_RS08895 WP_003703428.1 1709769..1710164(-) (comE) [Neisseria gonorrhoeae strain TUM15753]
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
Nucleotide
Download Length: 396 bp
>NTDB_id=81094 HT081_RS08895 WP_003703428.1 1709769..1710164(-) (comE) [Neisseria gonorrhoeae strain TUM15753]
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |