Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | HT078_RS07945 | Genome accession | NZ_AP023071 |
| Coordinates | 1527077..1527622 (+) | Length | 181 a.a. |
| NCBI ID | WP_003692554.1 | Uniprot ID | Q5FAD1 |
| Organism | Neisseria gonorrhoeae strain TUM15748 | ||
| Function | pseudopilus extrusion and retraction (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1522077..1532622
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HT078_RS07925 (TUM15748C_15510) | - | 1522146..1524542 (-) | 2397 | WP_172760407.1 | penicillin-binding protein 1A | - |
| HT078_RS07930 (TUM15748C_15520) | - | 1524694..1525809 (+) | 1116 | WP_003696683.1 | type IV pilus biogenesis protein PilM | - |
| HT078_RS07935 (TUM15748C_15530) | pilN | 1525812..1526411 (+) | 600 | WP_003687354.1 | PilN domain-containing protein | Machinery gene |
| HT078_RS07940 (TUM15748C_15540) | pilO | 1526412..1527059 (+) | 648 | WP_003690570.1 | type 4a pilus biogenesis protein PilO | - |
| HT078_RS07945 (TUM15748C_15550) | pilP | 1527077..1527622 (+) | 546 | WP_003692554.1 | pilus assembly protein PilP | Machinery gene |
| HT078_RS07950 (TUM15748C_15560) | pilQ | 1527641..1529836 (+) | 2196 | WP_003696681.1 | type IV pilus secretin PilQ | Machinery gene |
| HT078_RS07960 (TUM15748C_15580) | - | 1531105..1531617 (+) | 513 | WP_172760406.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 181 a.a. Molecular weight: 20094.62 Da Isoelectric Point: 4.7529
>NTDB_id=81037 HT078_RS07945 WP_003692554.1 1527077..1527622(+) (pilP) [Neisseria gonorrhoeae strain TUM15748]
MKHYALLISFLALSACSQNSEDLNEWMAQTRREAKAEIIPFQAPTLPVAPVYSPPQLTGPNAFDFRRMETAKKGENAPDT
KRIKETLEKFSLENMRYVGILKSGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIILNELIEDSTGNWVSRKAE
LLLNSSDKNTEQAAAPAAEQN
MKHYALLISFLALSACSQNSEDLNEWMAQTRREAKAEIIPFQAPTLPVAPVYSPPQLTGPNAFDFRRMETAKKGENAPDT
KRIKETLEKFSLENMRYVGILKSGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIILNELIEDSTGNWVSRKAE
LLLNSSDKNTEQAAAPAAEQN
Nucleotide
Download Length: 546 bp
>NTDB_id=81037 HT078_RS07945 WP_003692554.1 1527077..1527622(+) (pilP) [Neisseria gonorrhoeae strain TUM15748]
ATGAAACACTATGCCTTACTCATCAGCTTTCTGGCTCTCTCCGCGTGTTCCCAAAATTCTGAAGACCTAAACGAATGGAT
GGCACAAACGCGACGCGAAGCCAAAGCAGAAATCATACCTTTCCAAGCACCTACCCTGCCGGTTGCGCCGGTATACAGCC
CGCCGCAGCTTACAGGGCCGAACGCATTCGACTTCCGCCGCATGGAAACCGCCAAAAAAGGGGAAAATGCCCCCGACACC
AAGCGTATTAAAGAAACGCTGGAAAAATTCAGTTTGGAAAATATGCGTTATGTCGGCATTTTGAAGTCCGGACAGAAAGT
CTCCGGCTTCATCGAGGCTGAAGGTTATGTCTACACTGTCGGTGTCGGCAACTATTTGGGACAAAACTACGGTAGAATCG
AAAGCATTACCGACGACAGCATCATCCTGAACGAGCTGATAGAAGACAGCACGGGCAACTGGGTTTCCCGTAAAGCAGAA
CTGCTGTTGAATTCTTCCGACAAAAACACCGAACAAGCGGCAGCACCTGCCGCAGAACAAAATTAA
ATGAAACACTATGCCTTACTCATCAGCTTTCTGGCTCTCTCCGCGTGTTCCCAAAATTCTGAAGACCTAAACGAATGGAT
GGCACAAACGCGACGCGAAGCCAAAGCAGAAATCATACCTTTCCAAGCACCTACCCTGCCGGTTGCGCCGGTATACAGCC
CGCCGCAGCTTACAGGGCCGAACGCATTCGACTTCCGCCGCATGGAAACCGCCAAAAAAGGGGAAAATGCCCCCGACACC
AAGCGTATTAAAGAAACGCTGGAAAAATTCAGTTTGGAAAATATGCGTTATGTCGGCATTTTGAAGTCCGGACAGAAAGT
CTCCGGCTTCATCGAGGCTGAAGGTTATGTCTACACTGTCGGTGTCGGCAACTATTTGGGACAAAACTACGGTAGAATCG
AAAGCATTACCGACGACAGCATCATCCTGAACGAGCTGATAGAAGACAGCACGGGCAACTGGGTTTCCCGTAAAGCAGAA
CTGCTGTTGAATTCTTCCGACAAAAACACCGAACAAGCGGCAGCACCTGCCGCAGAACAAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Neisseria meningitidis MC58 |
98.343 |
100 |
0.983 |