Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | HT078_RS07935 | Genome accession | NZ_AP023071 |
| Coordinates | 1525812..1526411 (+) | Length | 199 a.a. |
| NCBI ID | WP_003687354.1 | Uniprot ID | A0AA44U8R8 |
| Organism | Neisseria gonorrhoeae strain TUM15748 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1520812..1531411
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HT078_RS07920 (TUM15748C_15500) | yihA | 1521396..1522025 (+) | 630 | WP_003687358.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| HT078_RS07925 (TUM15748C_15510) | - | 1522146..1524542 (-) | 2397 | WP_172760407.1 | penicillin-binding protein 1A | - |
| HT078_RS07930 (TUM15748C_15520) | - | 1524694..1525809 (+) | 1116 | WP_003696683.1 | type IV pilus biogenesis protein PilM | - |
| HT078_RS07935 (TUM15748C_15530) | pilN | 1525812..1526411 (+) | 600 | WP_003687354.1 | PilN domain-containing protein | Machinery gene |
| HT078_RS07940 (TUM15748C_15540) | pilO | 1526412..1527059 (+) | 648 | WP_003690570.1 | type 4a pilus biogenesis protein PilO | - |
| HT078_RS07945 (TUM15748C_15550) | pilP | 1527077..1527622 (+) | 546 | WP_003692554.1 | pilus assembly protein PilP | Machinery gene |
| HT078_RS07950 (TUM15748C_15560) | pilQ | 1527641..1529836 (+) | 2196 | WP_003696681.1 | type IV pilus secretin PilQ | Machinery gene |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22183.53 Da Isoelectric Point: 9.8898
>NTDB_id=81036 HT078_RS07935 WP_003687354.1 1525812..1526411(+) (pilN) [Neisseria gonorrhoeae strain TUM15748]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIGELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIGELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=81036 HT078_RS07935 WP_003687354.1 1525812..1526411(+) (pilN) [Neisseria gonorrhoeae strain TUM15748]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGCGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGGGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGCGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGGGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
97.487 |
100 |
0.975 |