Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   P6M73_RS10355 Genome accession   NZ_CP120965
Coordinates   2242166..2243926 (+) Length   586 a.a.
NCBI ID   WP_277852982.1    Uniprot ID   -
Organism   Proteiniclasticum sp. QWL-01     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2237166..2248926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P6M73_RS10330 (P6M73_10330) - 2237640..2239022 (-) 1383 WP_277852978.1 MATE family efflux transporter -
  P6M73_RS10335 (P6M73_10335) - 2239287..2239454 (-) 168 WP_277852979.1 hypothetical protein -
  P6M73_RS10340 (P6M73_10340) - 2239862..2240380 (+) 519 WP_277852980.1 QueT transporter family protein -
  P6M73_RS10345 (P6M73_10345) - 2240533..2241354 (-) 822 WP_277855761.1 ZIP family metal transporter -
  P6M73_RS10350 (P6M73_10350) - 2241650..2242084 (+) 435 WP_277852981.1 MarR family transcriptional regulator -
  P6M73_RS10355 (P6M73_10355) rcrP 2242166..2243926 (+) 1761 WP_277852982.1 ABC transporter ATP-binding protein Regulator
  P6M73_RS10360 (P6M73_10360) rcrQ 2243923..2245779 (+) 1857 WP_277852983.1 ABC transporter ATP-binding protein Regulator
  P6M73_RS10365 (P6M73_10365) - 2245868..2247478 (-) 1611 WP_277852984.1 IS1634 family transposase -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64863.36 Da        Isoelectric Point: 5.5997

>NTDB_id=809660 P6M73_RS10355 WP_277852982.1 2242166..2243926(+) (rcrP) [Proteiniclasticum sp. QWL-01]
MLKLFKHLKSHEWVQFAVSLVFIVAQVWLDLKLPDYMSGITRLVQTPGSDMSEIWTQGGYMMLCALGSVASAVVVGFFAA
RIAASFSQRLRSDLFHQVESFSMEEINRFSTSSLITRSTNDVTQIQMLVTMGLQMIIKAPIMTVWAITKIAGKGFEWSMA
TGVAVLVMVLMIAFVMIFVIPKFRRMQTLTDNLNKVTRENLTGLRVVRAYNAEDFQEAKFEKANAELTETQLFTSRSMAI
MMPMMNIVMSGLTLAIYWIGANLIDAAQAMEKLTIFSNMVVFSAYAMQVIMSFMMLAMMFILLPRAAVSARRINEVLDTE
PAIVNGRQTEGLPGETGTVEFSHVSFQYPGAAEYVLQDVSFTAKQGETVAFIGSTGSGKSTLINLIPRFFDATEGEVRID
GVNVKDYALNALYNKIGYVPQKAALFMGSVSFNVNYGENGKMPASEEEVKKAVAIAQGTDFVETMDGQYEASIAQSGSNL
SGGQKQRLAIARAICRKPEIYIFDDSFSALDYKTDRVLRTALQKETAGVTNLIVAQRIGTIMDADRIIVLDEGRVVGSGT
HKELLEKCQVYREIAMSQLSEEELVS

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=809660 P6M73_RS10355 WP_277852982.1 2242166..2243926(+) (rcrP) [Proteiniclasticum sp. QWL-01]
ATGTTGAAGTTATTTAAACATCTTAAGTCCCACGAGTGGGTACAATTTGCGGTCAGTCTGGTGTTCATCGTAGCCCAGGT
CTGGCTGGACCTGAAACTGCCGGATTACATGTCAGGAATCACCCGGCTGGTCCAAACGCCCGGCAGTGATATGAGCGAAA
TCTGGACACAGGGCGGCTACATGATGCTGTGCGCACTGGGCAGCGTCGCGTCAGCCGTCGTTGTAGGTTTTTTTGCCGCC
CGGATCGCCGCTTCCTTTTCCCAAAGGCTTCGCAGTGACTTGTTTCACCAGGTGGAATCTTTCTCCATGGAGGAAATCAA
CCGGTTTTCTACCAGCAGCCTGATCACTCGATCAACCAATGATGTCACTCAGATTCAGATGCTGGTCACCATGGGCTTGC
AAATGATCATTAAGGCCCCCATCATGACCGTGTGGGCCATCACAAAAATAGCTGGTAAGGGTTTTGAATGGTCGATGGCG
ACCGGCGTGGCGGTACTCGTCATGGTTCTGATGATCGCCTTCGTCATGATCTTTGTCATACCAAAATTCCGAAGAATGCA
GACCCTGACGGATAATTTGAACAAAGTTACCCGTGAGAACCTGACCGGTCTGCGCGTAGTCCGAGCATATAACGCTGAAG
ATTTTCAGGAAGCGAAATTCGAGAAGGCCAATGCTGAACTGACAGAAACGCAGCTGTTTACCAGTCGGAGCATGGCAATT
ATGATGCCAATGATGAACATCGTTATGAGCGGACTGACTCTGGCAATCTACTGGATCGGTGCAAACCTGATTGACGCGGC
ACAGGCTATGGAGAAACTGACCATTTTCTCCAATATGGTTGTCTTCTCAGCATATGCCATGCAGGTCATCATGTCTTTCA
TGATGCTGGCCATGATGTTCATACTGCTGCCCCGGGCCGCTGTTTCTGCCCGCCGGATCAACGAAGTCCTGGATACTGAG
CCTGCCATTGTGAATGGCCGTCAAACGGAAGGTTTGCCCGGTGAGACTGGCACGGTTGAATTCAGTCATGTCAGTTTTCA
ATATCCCGGAGCTGCCGAGTACGTTCTCCAGGATGTCAGCTTTACCGCGAAGCAGGGAGAAACTGTGGCCTTTATCGGAT
CCACCGGAAGCGGTAAAAGTACCCTGATTAATCTGATTCCACGTTTTTTTGATGCCACAGAAGGTGAAGTCCGGATTGAC
GGTGTCAATGTCAAAGACTATGCCCTGAATGCGTTATACAACAAAATCGGTTATGTGCCGCAAAAGGCAGCTCTGTTTAT
GGGATCGGTTTCCTTCAATGTGAATTACGGTGAGAACGGCAAGATGCCAGCAAGCGAAGAAGAGGTAAAAAAAGCGGTTG
CCATTGCCCAGGGAACGGATTTTGTGGAAACGATGGATGGACAATATGAGGCATCCATCGCTCAGAGCGGCAGCAATCTC
TCGGGCGGTCAGAAACAGCGTCTTGCCATCGCACGGGCGATCTGCCGAAAACCGGAAATCTATATCTTCGATGACAGTTT
TTCAGCCCTGGACTACAAGACTGACCGTGTTCTGCGAACAGCTCTGCAGAAAGAAACCGCCGGTGTCACCAATCTCATCG
TGGCTCAGCGGATTGGCACCATCATGGATGCGGACCGGATTATCGTCCTGGATGAAGGTCGCGTCGTGGGTTCTGGCACC
CATAAGGAACTACTGGAGAAATGCCAGGTCTATCGAGAAATCGCCATGTCCCAACTTAGTGAAGAGGAGCTTGTTTCATG
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(54-292)

ABC transporter (ABC_tran)

(356-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

53.691

100

0.546