Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   P6M73_RS10360 Genome accession   NZ_CP120965
Coordinates   2243923..2245779 (+) Length   618 a.a.
NCBI ID   WP_277852983.1    Uniprot ID   -
Organism   Proteiniclasticum sp. QWL-01     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2238923..2250779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P6M73_RS10335 (P6M73_10335) - 2239287..2239454 (-) 168 WP_277852979.1 hypothetical protein -
  P6M73_RS10340 (P6M73_10340) - 2239862..2240380 (+) 519 WP_277852980.1 QueT transporter family protein -
  P6M73_RS10345 (P6M73_10345) - 2240533..2241354 (-) 822 WP_277855761.1 ZIP family metal transporter -
  P6M73_RS10350 (P6M73_10350) - 2241650..2242084 (+) 435 WP_277852981.1 MarR family transcriptional regulator -
  P6M73_RS10355 (P6M73_10355) rcrP 2242166..2243926 (+) 1761 WP_277852982.1 ABC transporter ATP-binding protein Regulator
  P6M73_RS10360 (P6M73_10360) rcrQ 2243923..2245779 (+) 1857 WP_277852983.1 ABC transporter ATP-binding protein Regulator
  P6M73_RS10365 (P6M73_10365) - 2245868..2247478 (-) 1611 WP_277852984.1 IS1634 family transposase -
  P6M73_RS10370 (P6M73_10370) - 2247835..2249199 (-) 1365 WP_277852985.1 CHAD domain-containing protein -
  P6M73_RS10375 (P6M73_10375) - 2249443..2249595 (+) 153 WP_277852986.1 hypothetical protein -
  P6M73_RS10380 (P6M73_10380) - 2249702..2250553 (+) 852 WP_277852987.1 hypothetical protein -

Sequence

Protein


Download         Length: 618 a.a.        Molecular weight: 67602.51 Da        Isoelectric Point: 7.2473

>NTDB_id=809661 P6M73_RS10360 WP_277852983.1 2243923..2245779(+) (rcrQ) [Proteiniclasticum sp. QWL-01]
MSKNTEKRPGSNGRFGMGPGMGGSVEKARDFKGTWKKLIHYMKSYVPVIIISLLAAAIGTVLQIVGPDVLKDITNEIAKG
LPALINGKPVLGKMDMSAIQNLVMLLVFFYAGAALLGFAQSFIMATVTQKISKALRTDIAQKINRLPLRYFDKVSYGDVL
SRVTNDVDAIGQTMNQSIGTLVTSVTMFIGALIMMFYTNWILALTAVAASVIGFALMILIMKKSQSFFSAQQKELGSING
HIEEIYSNHNVVKVYNGGNAAKQTFEAINTNLYTSAWKSQFFSGLMMPLMQFIGNLGYVAVCVVGAALALDGKISFGVIV
AFMLYIRLFTQPLSQMAQAANNLQRTAAAGERVFEFLGEPELADESEKVKALQGIRGDVEFRHVRFGYDPDKTIIHDFSA
SISAGQKVAIVGPTGAGKTTMVNLLMRFYDLDGGEILLDKIPIDSVPRENVHEQFCMVLQDSWLFEGSIKENIIYSKEGV
AEEDVISACKTVGLHHFIKTLPDGYDTILNEKASLSEGQKQLITIARAMIQNAPLLILDEATSSVDTRTERIVQTAMDGL
TVGRTSFVIAHRLSTIKNADLILVMKDGDIIESGNHKDLLGRNGFYADLYNSQFELAV

Nucleotide


Download         Length: 1857 bp        

>NTDB_id=809661 P6M73_RS10360 WP_277852983.1 2243923..2245779(+) (rcrQ) [Proteiniclasticum sp. QWL-01]
ATGAGTAAAAATACAGAAAAACGCCCCGGCTCCAACGGCCGCTTCGGAATGGGGCCAGGAATGGGCGGCTCCGTTGAAAA
AGCCAGAGACTTTAAGGGCACCTGGAAAAAGCTGATCCACTACATGAAATCGTATGTCCCGGTTATCATCATTTCATTGC
TCGCTGCTGCCATTGGCACTGTTCTGCAGATTGTTGGTCCAGACGTGCTGAAGGACATTACCAATGAGATCGCCAAAGGA
CTGCCTGCCCTGATCAATGGCAAGCCAGTTCTGGGAAAGATGGACATGAGCGCAATTCAGAACCTGGTGATGTTGCTTGT
TTTCTTCTATGCAGGCGCCGCTTTGCTTGGGTTTGCCCAGAGTTTCATTATGGCCACTGTGACCCAGAAAATTTCAAAAG
CACTGCGTACTGACATCGCACAGAAAATCAACCGTCTTCCCCTGCGCTATTTTGACAAAGTCAGCTATGGCGATGTCCTG
AGCCGCGTAACCAATGACGTGGACGCCATTGGTCAGACAATGAACCAGAGTATTGGCACCCTGGTTACCTCCGTCACCAT
GTTTATCGGAGCTTTGATCATGATGTTCTACACGAACTGGATCCTGGCATTGACAGCTGTGGCAGCCAGTGTGATCGGTT
TTGCCCTCATGATCCTGATCATGAAGAAATCACAGAGTTTTTTCAGTGCGCAGCAAAAGGAACTGGGCAGCATTAATGGG
CACATTGAAGAAATCTATTCCAACCACAATGTCGTTAAAGTTTACAATGGAGGGAATGCTGCCAAGCAGACCTTTGAGGC
AATCAACACCAACCTGTATACCAGTGCCTGGAAATCTCAGTTTTTCTCCGGACTGATGATGCCCCTCATGCAGTTTATCG
GCAACCTGGGTTATGTGGCTGTCTGTGTCGTTGGAGCAGCCCTGGCGCTGGACGGCAAAATCAGTTTTGGCGTTATCGTG
GCATTCATGCTGTATATCCGGCTATTCACTCAGCCCCTCTCACAAATGGCTCAGGCGGCAAACAATCTGCAGCGCACCGC
TGCTGCCGGGGAGCGAGTTTTTGAGTTCCTGGGTGAACCGGAACTGGCCGATGAAAGCGAGAAGGTCAAAGCACTCCAGG
GGATCCGGGGAGACGTCGAATTCAGGCATGTTCGTTTCGGCTATGACCCGGACAAGACGATCATCCATGACTTTTCCGCA
AGCATCTCCGCAGGCCAGAAAGTAGCCATCGTGGGTCCCACCGGAGCGGGCAAAACGACCATGGTCAATCTGCTGATGAG
ATTTTATGATCTAGACGGCGGTGAAATATTGCTGGATAAAATTCCCATCGACAGTGTTCCCAGAGAAAATGTCCATGAGC
AATTCTGCATGGTCTTACAAGATTCATGGCTGTTTGAAGGTTCCATCAAAGAAAACATCATTTACAGCAAGGAAGGCGTG
GCAGAAGAAGATGTCATTTCAGCCTGCAAAACAGTGGGTCTGCACCACTTCATCAAGACACTGCCTGATGGGTATGACAC
CATTCTCAATGAAAAGGCGAGCTTGTCCGAAGGCCAAAAACAGCTGATCACCATCGCCCGTGCCATGATCCAGAACGCAC
CCCTGCTGATTCTGGATGAAGCCACCAGTTCGGTTGACACCAGAACCGAACGGATTGTTCAGACTGCCATGGACGGCCTG
ACAGTAGGCAGGACATCCTTTGTCATTGCCCATCGTCTTTCTACCATTAAGAATGCCGATTTGATTCTGGTCATGAAGGA
CGGAGATATCATCGAAAGCGGCAATCATAAAGACCTGCTTGGCAGAAACGGCTTCTACGCGGACCTGTACAACAGTCAGT
TTGAACTCGCCGTTTAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(396-543)

ABC transporter transmembrane region (ABC_membrane)

(49-333)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

55.06

94.337

0.519