Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LLUC7005_RS11060 Genome accession   NZ_CP120933
Coordinates   2193743..2195029 (-) Length   428 a.a.
NCBI ID   WP_003130591.1    Uniprot ID   A0AB35KDA8
Organism   Lactococcus lactis subsp. lactis strain UC7005     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2188743..2200029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLUC7005_RS11045 (LLUC7005_11015) - 2189979..2190515 (-) 537 WP_003130594.1 hypothetical protein -
  LLUC7005_RS11050 (LLUC7005_11020) - 2190521..2191807 (-) 1287 WP_003130593.1 FAD/NAD(P)-binding oxidoreductase -
  LLUC7005_RS11055 (LLUC7005_11025) - 2191823..2193673 (-) 1851 WP_003130592.1 proline--tRNA ligase -
  LLUC7005_RS11060 (LLUC7005_11030) eeP 2193743..2195029 (-) 1287 WP_003130591.1 RIP metalloprotease RseP Regulator
  LLUC7005_RS11065 (LLUC7005_11035) - 2195048..2195851 (-) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  LLUC7005_RS11070 (LLUC7005_11040) - 2195851..2196585 (-) 735 WP_003130589.1 isoprenyl transferase -
  LLUC7005_RS11075 (LLUC7005_11045) yajC 2196959..2197291 (-) 333 WP_003130588.1 preprotein translocase subunit YajC -
  LLUC7005_RS11080 (LLUC7005_11050) - 2197386..2198084 (-) 699 WP_003130586.1 DNA alkylation repair protein -
  LLUC7005_RS11085 (LLUC7005_11055) rlmH 2198103..2198582 (-) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46411.97 Da        Isoelectric Point: 6.7741

>NTDB_id=809455 LLUC7005_RS11060 WP_003130591.1 2193743..2195029(-) (eeP) [Lactococcus lactis subsp. lactis strain UC7005]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVRAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=809455 LLUC7005_RS11060 WP_003130591.1 2193743..2195029(-) (eeP) [Lactococcus lactis subsp. lactis strain UC7005]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATCGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCTGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCAAAAAAAATGGACGGAAGTTATCGTGTTGGCATTATGCAGT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCGAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGCCCAGTTGCTATATATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGACGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.845

100

0.572

  eeP Streptococcus thermophilus LMD-9

56.613

100

0.57