Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LLNCDO1820_RS11255 Genome accession   NZ_CP120927
Coordinates   2198427..2199713 (-) Length   428 a.a.
NCBI ID   WP_010906325.1    Uniprot ID   A0A2A9HU85
Organism   Lactococcus lactis subsp. lactis strain NCDO1820     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2193427..2204713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLNCDO1820_RS11240 (LLNCDO1820_11235) - 2194618..2195154 (-) 537 WP_010906322.1 hypothetical protein -
  LLNCDO1820_RS11245 (LLNCDO1820_11240) - 2195160..2196491 (-) 1332 WP_010906323.1 FAD/NAD(P)-binding oxidoreductase -
  LLNCDO1820_RS11250 (LLNCDO1820_11245) - 2196507..2198357 (-) 1851 WP_010906324.1 proline--tRNA ligase -
  LLNCDO1820_RS11255 (LLNCDO1820_11250) eeP 2198427..2199713 (-) 1287 WP_010906325.1 RIP metalloprotease RseP Regulator
  LLNCDO1820_RS11260 (LLNCDO1820_11255) - 2199732..2200535 (-) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  LLNCDO1820_RS11265 (LLNCDO1820_11260) - 2200535..2201269 (-) 735 WP_010906326.1 isoprenyl transferase -
  LLNCDO1820_RS11270 (LLNCDO1820_11265) yajC 2201641..2201973 (-) 333 WP_003130588.1 preprotein translocase subunit YajC -
  LLNCDO1820_RS11275 (LLNCDO1820_11270) - 2202068..2202765 (-) 698 Protein_2193 DNA alkylation repair protein -
  LLNCDO1820_RS11280 (LLNCDO1820_11275) rlmH 2202784..2203263 (-) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LLNCDO1820_RS11285 (LLNCDO1820_11280) - 2203302..2204249 (-) 948 WP_003130410.1 IS30 family transposase -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 46422.95 Da        Isoelectric Point: 6.5146

>NTDB_id=809408 LLNCDO1820_RS11255 WP_010906325.1 2198427..2199713(-) (eeP) [Lactococcus lactis subsp. lactis strain NCDO1820]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGFPAIVYLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=809408 LLNCDO1820_RS11255 WP_010906325.1 2198427..2199713(-) (eeP) [Lactococcus lactis subsp. lactis strain NCDO1820]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCCATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATTGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGCCCAGTTGCTATTTATCAACTCAGTGGTCAAGCCGC
GAGAGCAGGTTTTCCAGCTATTGTCTATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(218-269)

Peptidase family M50 (Peptidase_M50)

(7-413)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A9HU85

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.613

100

0.57
  eeP Streptococcus thermophilus LMD-9

56.381

100

0.568