Detailed information NTG0808940

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: RMP65_RS05340
• Genome accession: NZ_CP135089
• Coordinates: 1076598..1079864 (-)
• Length: 1088 a.a.
• NCBI ID: WP_313680949.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID34567
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1071598..1084864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMP65_RS05330 (RMP65_05330)	plsY	1072290..1072934 (+)	645	WP_313680946.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-
RMP65_RS05335 (RMP65_05335)	rexA	1072945..1076598 (-)	3654	WP_313680948.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
RMP65_RS05340 (RMP65_05340)	rexB	1076598..1079864 (-)	3267	WP_313680949.1	ATP-dependent nuclease subunit B	Machinery gene
RMP65_RS05345 (RMP65_05345)	-	1080029..1082473 (-)	2445	WP_313680950.1	MucBP domain-containing protein	-

Sequence

Protein

• Length: 1088 a.a.
• Molecular weight: 124654.95 Da
• Isoelectric Point: 5.0936

>NTDB_id=808940 RMP65_RS05340 WP_313680949.1 1076598..1079864(-) (rexB) [Streptococcus suis strain ID34567]
MKLVYTDIRNPLTQYLTDIAAEFAKEAKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQP
LDDVGLAMIFFRVLSQFEDGDLKVYGRLQTDFGFINQLVALYKELQRANMSILDLEAMESPDKQADLVKIFLAVTDILSN
EGFEHQSKLAQLISLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKKAVQATYAEGNVYQAN
VDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHVHQ
GARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFMESLERLRRYRFRAEDLLNLLKSGLYASISQK
ELDLFESYILFADMRGQAAFSRAFSVNSRADYDVETVKEKRLVYDLTVLEPLRAKIMEPLNQLFKAGPQSGTALLEKFMV
FLEAIELPTNMEKMSRNLSEVEQEKEEQVWKSFTHILENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVK
SYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHAAMMSLLNAATEQLVIS
TPQIYNEGEDSLSPYIKILQKMGLKSEERGRMKTLSPQDIGHYKSLLSRLIESERPSLEHEEWEGQTAFWTVLVRHLKKK
LESQGIEIPTITGEITSKQLAADTLAALYPEDKPLNLSASSLTNFYNNQYLYFVRNVLRLREQESIHPTAFQHGLFLHRI
FERVVMDQSELDFDQKVDKAILHTRDEAEFAMFYRQDADARYTEEVLDKIARSSATILRDNDLVEIDGQEKSFRQDKALV
FDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETRDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEEEFAVLLNHNQELYKQAAKDILDGRFAINPY
TKDGRSVAGEQLKAITGFEADRHMGMARRLIKEAKRQDWMERMKGGQD

Nucleotide

• Length: 3267 bp

>NTDB_id=808940 RMP65_RS05340 WP_313680949.1 1076598..1079864(-) (rexB) [Streptococcus suis strain ID34567]
ATGAAATTAGTCTATACAGATATTCGCAATCCTCTGACGCAGTATTTAACGGATATCGCAGCAGAATTTGCTAAGGAAGC
TAAGCGAGTTTTTTACATTGCTCCAAACTCTCTATCTTTTGAGATGGAGCGCAAGGTCTTGGAATATTTGCCTGAACAGG
CAACTTTTGATATTATCGTGACTCGTTTTGGGCAATTAGCCCGCTATTTGATGATTGATAGGAAAGAAGCAGGTCAACCG
CTGGATGATGTTGGTCTGGCCATGATTTTCTTTCGTGTTCTATCGCAATTTGAAGATGGCGACTTGAAAGTCTATGGTCG
TTTACAGACAGATTTTGGGTTCATTAACCAGCTAGTTGCTTTATACAAAGAATTGCAACGGGCAAATATGTCTATTTTGG
ACTTGGAAGCCATGGAGTCACCAGATAAGCAGGCTGATTTGGTAAAGATTTTTCTGGCTGTAACAGACATTTTGTCCAAT
GAAGGCTTTGAGCATCAGTCTAAGTTAGCACAGCTGATTAGCTTGGTGGAAACTGGTCAGTTGGATGAGCAGTTGAAGAA
CATTGTGCTGGTGGTAGACGGATTTTCTCGTTTTTCGGCAGAAGAAGAAGCTTTAGTAAGTGCTTTAAATGAACGGGTGT
CGGAAATCCTGATTGGTGTATATGCCAGCAAAAAAGCTGTGCAAGCGACCTATGCGGAAGGGAACGTTTATCAAGCCAAC
GTTGACTTTTTACGTCAGTTATCAGCGCAGTTCCAGACTAAGGCTACTTATATTGGTCAAGAGCCAGTCTTGGACAGTAT
TGGTAAATTTTCAAAGAATATGGAAGCCTATTATGACTACAGCGGGACCATGATAGACTTGACTCCAGCAGACCAAGAAA
AAATCCAACTCTGGGAAGTCGTCAACCAAAAAGAAGAAGTTGAGCAGGTTGCGACTGCAATTCGTCAGCATGTGCATCAA
GGGGCTCGCTATAAAGACATCTTATTACTTTTGGGTGATGTGGATAGCTACAAGTTGCAGATTGGCAAGATTTTTGACAA
GTATGATATTCCTTACTATTTTGGTAAGGCAGAGGAGATGAGTCATCATCCCCTGGTCCATTTTATGGAGTCCTTGGAGC
GCTTGCGCCGCTATCGTTTCCGAGCGGAAGACTTGCTCAATCTCCTCAAATCTGGTTTGTACGCCAGCATTTCCCAAAAG
GAGCTGGACCTATTTGAGTCTTACATCCTCTTTGCGGATATGAGGGGACAGGCTGCTTTTTCGCGGGCTTTTTCGGTCAA
TAGCAGAGCGGACTACGATGTTGAGACTGTCAAGGAGAAGCGACTTGTCTATGATTTGACTGTCTTGGAACCCCTGCGTG
CTAAGATTATGGAGCCTTTGAACCAGCTGTTTAAGGCTGGACCACAATCTGGAACTGCCTTGCTTGAGAAATTTATGGTA
TTTTTGGAGGCAATTGAGCTTCCAACGAATATGGAAAAAATGTCTCGAAATTTGAGTGAAGTAGAGCAAGAAAAAGAAGA
GCAGGTCTGGAAAAGTTTTACCCATATTCTAGAGAATTTTCATCAGATTTTCGGAAAAGAAAAATTGAAAATGGATGATT
TTCTGGCTATTTTACAGGCTGGCATGCAGGCCAGTCACTATCGTACCGTTCCTGCAACGGTTGATGTGGTCAATGTCAAA
TCCTATGATTTGATCGAGCCACACACTGCTAAGTATGTTTATGCTATCGGAATGGGCCAGTCCAATTTTCCAAAAGTTGC
CAAGAATACCAGTCTATTGACAGAAGAAGAGATGGAAAAAGTCAATCTTGTCTCGGCTAGTTCTTCACGTTTTGATTTGG
TCAGTCGAGAGAATATCAAGAAGAACCATGCTGCCATGATGTCTCTGCTGAATGCTGCGACGGAACAGTTAGTTATTTCA
ACTCCTCAGATTTATAACGAAGGCGAAGATAGTCTCTCACCTTATATCAAGATTCTTCAAAAAATGGGGCTGAAATCCGA
AGAACGTGGACGGATGAAAACACTTAGTCCGCAAGACATCGGTCACTACAAGAGTCTCTTATCCCGTTTGATTGAGTCGG
AAAGACCCTCTCTTGAACATGAAGAATGGGAAGGGCAGACGGCCTTCTGGACAGTATTGGTTCGCCATTTGAAGAAGAAA
TTGGAGTCACAAGGCATTGAAATTCCGACCATTACTGGCGAAATTACTTCTAAACAGCTTGCAGCTGATACCTTGGCTGC
TTTATATCCAGAGGATAAGCCGCTCAATCTTTCTGCATCCAGCTTGACCAATTTTTACAATAACCAATATCTTTACTTTG
TCCGTAATGTTCTGCGATTGCGGGAACAGGAATCCATCCATCCGACGGCCTTTCAGCATGGTTTGTTCTTGCATCGGATT
TTTGAACGAGTGGTCATGGACCAATCTGAGCTAGATTTTGATCAAAAAGTGGACAAGGCCATCCTGCATACGCGTGACGA
GGCAGAATTTGCTATGTTTTATAGACAAGATGCAGATGCTCGCTATACGGAGGAGGTGCTGGATAAGATTGCTCGTTCCA
GTGCGACTATTTTGCGGGATAATGATTTAGTTGAAATTGATGGTCAGGAAAAAAGTTTCCGTCAGGATAAGGCGCTGGTT
TTTGACCTTCAAAATGGCAAGAGTGTGCATGTAAATGGTACAATTGACCGCTTGGATACCTTACAAATCAATCAGGCTGT
CGGTGTTGTGGATTACAAGTCCAGCGACCAATCTTTTTCAGTTGGGGATTTTTACAATGGTCTCAAACCTCAGTTGGTGA
CCTACCTGGCAGCCTTACAAGAGCTGGATGAAACCAGGGATAAACCAGTTTTTGGGGCTATGTATTTGCATTTGCAGGAT
CCGATTATCAAGTTAAAAGACACGAAAAATTTAGAACAGCTAGAAGGAGCTGCCAATACGAGTTTGGTCTACAAGGGGCT
TTTCTTGAAGGAGGAAAGTCTGGGGCTCAATCATTTTTATCAAACTCGTAACCAACTCTACACGGAAGAAGAGTTTGCGG
TTTTATTGAACCACAACCAAGAACTCTACAAACAAGCTGCCAAGGACATCCTGGATGGTCGCTTTGCTATTAACCCTTAT
ACCAAAGATGGTCGTTCGGTAGCAGGTGAGCAGCTGAAGGCAATCACTGGTTTTGAGGCTGATCGGCACATGGGTATGGC
ACGGCGGTTGATCAAAGAGGCCAAGCGTCAGGATTGGATGGAACGAATGAAAGGAGGTCAGGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (757-1042)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	45.059	100	0.457