Detailed information NTG0808939

Bioinformatically predicted

Overview

• Name: rexA
• Type: Machinery gene
• Locus tag: RMP65_RS05335
• Genome accession: NZ_CP135089
• Coordinates: 1072945..1076598 (-)
• Length: 1217 a.a.
• NCBI ID: WP_313680948.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID34567
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1067945..1081598

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMP65_RS05315 (RMP65_05315)	-	1068655..1069713 (-)	1059	WP_153055017.1	hypothetical protein	-
RMP65_RS05320 (RMP65_05320)	-	1069802..1070149 (-)	348	WP_238145574.1	YkvA family protein	-
RMP65_RS05325 (RMP65_05325)	parE	1070204..1072147 (-)	1944	WP_105183850.1	DNA topoisomerase IV subunit B	-
RMP65_RS05330 (RMP65_05330)	plsY	1072290..1072934 (+)	645	WP_313680946.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-
RMP65_RS05335 (RMP65_05335)	rexA	1072945..1076598 (-)	3654	WP_313680948.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
RMP65_RS05340 (RMP65_05340)	rexB	1076598..1079864 (-)	3267	WP_313680949.1	ATP-dependent nuclease subunit B	Machinery gene

Sequence

Protein

• Length: 1217 a.a.
• Molecular weight: 139981.30 Da
• Isoelectric Point: 4.9918

>NTDB_id=808939 RMP65_RS05335 WP_313680948.1 1072945..1076598(-) (rexA) [Streptococcus suis strain ID34567]
MVFEEFLSVEEIKAVQLAEANSDKQQKRTPEQIEAIYTQGQNVLVSASAGSGKTFVMVQRILDKLKRGVGIDQLFISTFT
VKAAGELKERIEKNLNETIAETTDMELRRHLSAQLADLTKADIGTMDSFTQKLVTTYGYSLGISPQFRILQDETEKASLK
KEVFDQLFAEYLEEDENGAFRKLVRNFSGNRKDNSGFRQVVYQVHDFSQSTSSPTKWLKEQAVQADLYSQERIEQILEQG
FKEKVLDKLYQAADFFRYHVEWGRNDFGSAKYFANVEEVLDLLTGLDSLDQKDLMERVEKILLINDQSRGKGLTNANRPK
DEHLIAFKEDYNAGKSQIISGLRDLGQEVYELTLLKDYQVQALPLLVLLRDFVLDFSQAYLDVKIKEAAFEFGDIGHFAI
RILEENADIRQFFQEKYHEVMVDEYQDNNHSQERMLDLLSNGHNRFMVGDIKQSIYRFRQADPMIFQEKFELYQANQEAG
KLILLKENFRSQIEVLEATNAIFTRLMDRQVGEIKYDDTHSLVAGSPGQKIAQPKHEMEYFIYDQQESASSSTDTEEDAL
LTAGEIEVVAKEIIRLHNEEGADFKDITLLVQKRTHNDLIMSIFEKHGIPIVADGGAVSYLQSLEVMIMLDTLRVINNPL
NDYALIALLKSPMFRFDEDELTRISLQAGTGFFYQKMEIAQQTNGQHPELMSEKLKKKIKDFLSILENWRTFAKLHSIYD
LIWKIFNEKFYYDYVGALPNGSKRQANLYALGLRANQFEKTGYKGLSRFIAMIDRALANDKDLADVQEFLPQNAVQLMTI
HKSKGLEFKYVFLMNIDKRFNLEDHYQSVIISRKNGLGIQYLADMKDKVNSPLPQVRVLMNTLPYQKNLQELKIANLSEQ
MRLLYVALTRAEKKLYLVGKGNADKLAEKYDGKKEDGVLAQSTRESMATFQDWILAIDEAFSGEDLHFKKVFVTDEDLTE
EKIGKLTLKSKLEDASLKDIRQSEDIAQALDQLSSVQELNERYKAAIELPSLRTPSQIKKLYEPILEQEGMEVMEKYQPK
RTFNLPDFSKKPRITGAQVGSAVHELMQRLDLSWLVTEDTVREALEAVHADHAVKDKINVQMILEFFDTDLGREILANTD
KLHREAPFASLQTDPVSQEDFVLRGIIDGYLLHDDHIVLFDYKTDKYDQPIQLSQRYQAQMQLYAEALKKAYKIERVDCH
LILLGGERIEVVEVNTN

Nucleotide

• Length: 3654 bp

>NTDB_id=808939 RMP65_RS05335 WP_313680948.1 1072945..1076598(-) (rexA) [Streptococcus suis strain ID34567]
ATGGTTTTTGAAGAATTTTTAAGCGTGGAAGAAATCAAGGCTGTGCAGCTTGCGGAAGCTAATTCTGATAAGCAACAAAA
ACGCACACCTGAGCAGATTGAAGCTATCTATACGCAGGGTCAGAATGTTCTGGTTTCTGCATCGGCTGGGTCAGGAAAGA
CCTTCGTTATGGTTCAACGGATTTTGGATAAATTGAAGCGTGGTGTGGGAATAGACCAGCTCTTTATCTCGACCTTTACA
GTTAAAGCGGCTGGTGAGTTGAAGGAGCGGATTGAGAAAAATCTCAATGAAACCATTGCGGAGACGACCGATATGGAATT
GCGTCGGCATTTGTCTGCCCAGTTGGCGGATTTGACCAAGGCAGACATCGGGACCATGGACTCCTTTACGCAGAAATTGG
TCACAACCTATGGTTATAGTCTTGGCATTTCTCCGCAGTTTCGGATTTTACAGGATGAGACAGAAAAAGCGAGTCTGAAA
AAAGAGGTTTTTGACCAGCTCTTTGCAGAATATCTCGAAGAGGATGAAAATGGTGCATTCCGCAAACTGGTTCGCAATTT
TTCGGGCAATCGTAAGGATAATAGTGGTTTCCGTCAGGTTGTTTATCAGGTGCATGATTTTAGCCAATCGACGAGCAGTC
CAACTAAATGGCTGAAAGAGCAGGCTGTTCAAGCTGATTTGTACAGTCAAGAGCGTATAGAGCAGATCTTAGAGCAAGGC
TTTAAGGAAAAAGTTTTAGACAAGCTCTATCAAGCTGCAGATTTCTTCCGCTACCATGTGGAATGGGGCAGAAATGACTT
TGGTTCCGCCAAGTATTTTGCCAATGTGGAAGAAGTCTTGGATTTGCTGACAGGTTTAGATAGTCTGGACCAGAAGGACT
TGATGGAGCGGGTTGAAAAAATTCTTCTCATCAATGACCAGTCTAGAGGTAAAGGTTTGACAAATGCCAATCGACCAAAA
GATGAGCATTTGATAGCCTTTAAAGAAGATTACAATGCAGGCAAGAGCCAGATTATCTCAGGACTTAGAGATTTGGGTCA
GGAAGTTTATGAATTGACCCTGCTGAAAGATTATCAGGTTCAAGCTTTGCCACTGCTTGTATTATTACGTGACTTTGTCT
TGGATTTTTCGCAGGCTTATCTGGATGTCAAAATCAAGGAAGCAGCTTTTGAATTTGGCGATATTGGGCATTTCGCTATT
CGCATTTTAGAAGAAAATGCGGACATCCGCCAGTTTTTCCAAGAAAAATACCACGAAGTCATGGTGGATGAGTACCAGGA
TAACAACCATAGCCAAGAGCGGATGTTGGACTTGCTGTCTAACGGGCATAATCGCTTTATGGTGGGCGACATTAAGCAGT
CCATCTATCGATTCCGTCAGGCGGATCCGATGATTTTTCAAGAGAAATTTGAACTGTATCAGGCAAATCAAGAAGCCGGA
AAATTGATTCTGCTCAAGGAAAATTTCCGTAGTCAGATTGAGGTCTTGGAGGCAACAAATGCTATCTTCACGCGCCTGAT
GGACCGTCAAGTAGGGGAAATCAAGTATGACGACACCCACAGTCTAGTGGCTGGTAGTCCTGGTCAAAAAATTGCCCAGC
CCAAGCATGAGATGGAATACTTCATTTACGACCAGCAGGAGAGCGCGAGTTCTTCAACGGATACCGAGGAGGATGCTCTT
CTTACTGCAGGTGAGATTGAGGTCGTTGCAAAAGAGATTATTCGTCTTCACAATGAAGAAGGTGCAGACTTCAAGGACAT
CACTCTCTTGGTACAAAAGCGGACGCACAATGACCTCATTATGTCCATTTTTGAAAAACATGGGATTCCAATTGTGGCAG
ATGGCGGAGCAGTCTCCTATCTGCAATCTTTAGAAGTCATGATTATGCTGGATACCTTGCGGGTTATCAATAATCCACTC
AATGACTATGCCTTGATTGCCCTGCTTAAATCGCCTATGTTCCGATTCGATGAGGATGAGCTGACACGGATTTCCTTGCA
GGCTGGGACAGGTTTCTTTTACCAAAAAATGGAAATAGCCCAGCAAACAAATGGGCAACATCCTGAACTGATGTCAGAAA
AGTTGAAGAAGAAAATCAAGGATTTCTTGTCTATCTTAGAAAACTGGCGTACTTTTGCCAAACTGCATTCTATTTATGAC
TTGATTTGGAAGATTTTCAATGAAAAATTCTACTATGACTATGTCGGTGCTCTTCCAAATGGCAGCAAGCGTCAGGCCAA
TCTATATGCACTAGGTCTGCGTGCCAACCAGTTCGAAAAAACAGGCTACAAGGGCTTGTCCCGCTTCATCGCCATGATTG
ACCGTGCCTTAGCAAATGATAAGGATTTGGCAGATGTACAAGAGTTTCTACCGCAAAATGCTGTTCAGCTTATGACCATC
CATAAGTCAAAAGGTCTGGAGTTCAAATATGTCTTCCTCATGAACATCGATAAGCGATTCAACTTGGAAGACCATTACCA
GTCAGTCATCATCAGCCGGAAAAATGGTCTGGGTATCCAATATTTAGCGGATATGAAAGATAAGGTAAATAGCCCATTAC
CTCAGGTGCGAGTCTTAATGAACACCCTGCCTTATCAAAAGAATCTCCAAGAGCTAAAAATCGCAAATCTTTCAGAACAA
ATGCGGTTGCTTTATGTTGCACTAACGCGTGCAGAGAAGAAGCTGTATCTGGTTGGAAAGGGCAATGCTGACAAGTTAGC
TGAAAAATACGATGGCAAGAAGGAAGATGGCGTACTTGCCCAATCAACTCGTGAAAGTATGGCGACTTTCCAAGACTGGA
TTTTAGCTATTGATGAGGCCTTTTCAGGAGAAGACTTGCACTTCAAGAAAGTCTTTGTAACGGATGAGGATTTGACAGAG
GAGAAGATTGGTAAACTGACATTGAAGAGTAAGCTTGAAGACGCCAGCCTTAAAGATATTCGTCAATCAGAAGATATTGC
CCAGGCCTTGGACCAATTATCTTCTGTCCAAGAACTGAACGAACGCTATAAGGCTGCCATCGAATTACCAAGTTTACGCA
CTCCAAGTCAGATCAAAAAACTTTATGAACCAATCTTGGAACAAGAAGGTATGGAAGTTATGGAAAAATACCAGCCAAAA
CGGACCTTCAACTTGCCAGATTTCTCCAAGAAACCAAGAATCACTGGAGCCCAAGTCGGTTCAGCAGTCCATGAACTCAT
GCAACGCTTGGATCTGTCTTGGTTGGTGACAGAAGATACGGTAAGAGAAGCCCTAGAAGCTGTTCATGCTGACCATGCAG
TTAAAGACAAAATCAATGTTCAGATGATTTTAGAGTTCTTTGATACAGATTTAGGAAGAGAAATTCTAGCCAATACGGAC
AAACTTCACCGAGAAGCACCGTTTGCAAGTTTGCAGACTGATCCTGTATCACAGGAAGACTTTGTCCTTCGTGGGATTAT
CGATGGCTACCTACTACATGATGATCACATCGTTCTGTTTGACTATAAGACAGACAAGTATGACCAACCAATCCAACTAA
GCCAACGTTACCAAGCTCAAATGCAACTCTATGCCGAGGCATTGAAAAAAGCCTACAAGATAGAGCGTGTAGACTGTCAT
TTGATTTTGCTTGGTGGGGAAAGGATTGAAGTGGTAGAAGTCAATACAAATTAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C) (483-897)

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (1037-1193)

• UvrD/REP helicase N-terminal domain (UvrD-helicase) (29-471)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexA	Streptococcus pneumoniae R6	51.349	100	0.516