Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   P4829_RS06100 Genome accession   NZ_CP120846
Coordinates   1214561..1215514 (+) Length   317 a.a.
NCBI ID   WP_010788227.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain MBLB1156     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1209561..1220514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P4829_RS06075 (P4829_06075) argF 1211367..1212320 (+) 954 WP_063637418.1 ornithine carbamoyltransferase -
  P4829_RS06080 (P4829_06080) - 1212419..1212598 (+) 180 WP_003327605.1 YjzC family protein -
  P4829_RS06085 (P4829_06085) - 1212627..1212815 (-) 189 WP_003327604.1 YjzD family protein -
  P4829_RS06090 (P4829_06090) - 1213074..1213808 (+) 735 WP_063637420.1 hypothetical protein -
  P4829_RS06095 (P4829_06095) - 1213896..1214471 (+) 576 WP_063637422.1 hypothetical protein -
  P4829_RS06100 (P4829_06100) med 1214561..1215514 (+) 954 WP_010788227.1 BMP family ABC transporter substrate-binding protein Regulator
  P4829_RS06105 (P4829_06105) comZ 1215529..1215720 (+) 192 WP_010788228.1 ComZ family protein Regulator
  P4829_RS06110 (P4829_06110) - 1215750..1215977 (-) 228 WP_003327598.1 hypothetical protein -
  P4829_RS06115 (P4829_06115) fabH 1216149..1217087 (+) 939 WP_003327597.1 beta-ketoacyl-ACP synthase III -
  P4829_RS06120 (P4829_06120) fabF 1217109..1218347 (+) 1239 WP_010788230.1 beta-ketoacyl-ACP synthase II -
  P4829_RS06125 (P4829_06125) - 1218426..1219210 (+) 785 Protein_1150 DUF2268 domain-containing protein -
  P4829_RS06130 (P4829_06130) - 1219402..1220388 (+) 987 WP_010788232.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35410.91 Da        Isoelectric Point: 4.4404

>NTDB_id=808829 P4829_RS06100 WP_010788227.1 1214561..1215514(+) (med) [Bacillus atrophaeus strain MBLB1156]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLSIQSAYNVDVYYKEGVKTDEDILNAIED
YHKRGINLLFGHGSEYEEMFNLVSEDYPDMEFVISNAESKADNVTSVHLNGEAMGFFGGMTAAHMSKTNQIGVIASFKWQ
PEVDGFIKGAKYENPDITINTKYTDHWDDDTTAVKLYEKIKEEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYGIIAEQYSNGILESGDHYFDFKDHVVEMGTFSPLVDKAFQDKIAALIKTYNRTDELPKKE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=808829 P4829_RS06100 WP_010788227.1 1214561..1215514(+) (med) [Bacillus atrophaeus strain MBLB1156]
ATGATCACTAGGCTTGTCATGATCTTTTCTGTCCTCCTGTTACTGAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGTATGCTCTTTCCCGATACCATCAATGATCTAGTGTGGGGAACAAAAGGGTATAAAGGTTTACTAAGTA
TACAATCTGCATATAATGTCGACGTCTATTATAAAGAAGGCGTTAAGACTGATGAGGATATATTAAACGCTATTGAAGAT
TACCACAAGAGAGGGATAAACCTTCTTTTTGGCCATGGCAGTGAATACGAAGAAATGTTTAATCTGGTCAGTGAGGATTA
CCCGGACATGGAATTTGTCATTTCTAACGCGGAATCAAAAGCCGACAACGTCACAAGCGTTCATCTTAACGGAGAAGCAA
TGGGGTTTTTCGGCGGGATGACAGCCGCACATATGTCCAAAACCAATCAAATCGGCGTGATTGCTTCTTTTAAATGGCAG
CCTGAAGTAGACGGCTTCATCAAAGGGGCCAAGTATGAAAATCCGGACATCACTATCAATACGAAATATACAGACCACTG
GGATGACGATACCACAGCCGTGAAGCTTTATGAGAAGATAAAAGAGGAAGGCGCGGATGTTGTATATCCCGCCGGAGATG
GGTATAATGTTCCTGTCATTCAACAAATTAAAAAAGACGGTCTCTATGCGATCGGCTATGTCACAGACCAGTCTGATCTG
GGCGAAAATACCGTTTTGACAAGCACTGTTCAAAATGTGGACAAGGCCTATGGCATCATAGCCGAGCAATACAGCAACGG
CATTTTGGAAAGCGGAGATCACTATTTCGATTTTAAAGATCATGTCGTTGAAATGGGGACATTCAGTCCTCTTGTTGACA
AAGCCTTCCAAGATAAAATTGCCGCTCTTATCAAAACGTATAATCGAACAGATGAACTGCCGAAAAAAGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

87.382

100

0.874