Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   RMP67_RS02970 Genome accession   NZ_CP135087
Coordinates   587692..588426 (+) Length   244 a.a.
NCBI ID   WP_002943067.1    Uniprot ID   A0A0H3MU26
Organism   Streptococcus suis strain ID26102     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 582692..593426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMP67_RS02945 (RMP67_02945) - 583192..583500 (-) 309 WP_002938710.1 DUF1827 family protein -
  RMP67_RS02950 (RMP67_02950) - 583555..584016 (-) 462 WP_002938708.1 NUDIX hydrolase -
  RMP67_RS02955 (RMP67_02955) clpE 584202..586430 (-) 2229 WP_024383908.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  RMP67_RS02960 (RMP67_02960) - 586654..586884 (+) 231 WP_002938704.1 DUF1797 family protein -
  RMP67_RS02965 (RMP67_02965) - 587010..587699 (+) 690 WP_002938702.1 amino acid ABC transporter permease -
  RMP67_RS02970 (RMP67_02970) amiE 587692..588426 (+) 735 WP_002943067.1 amino acid ABC transporter ATP-binding protein Regulator
  RMP67_RS02975 (RMP67_02975) - 588556..589404 (+) 849 WP_029174040.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  RMP67_RS02980 (RMP67_02980) - 589647..589742 (+) 96 WP_313921107.1 YSIRK-type signal peptide-containing protein -
  RMP67_RS02985 (RMP67_02985) - 589880..590092 (+) 213 WP_313921108.1 hypothetical protein -
  RMP67_RS02990 (RMP67_02990) - 590112..590903 (+) 792 WP_313921109.1 hypothetical protein -
  RMP67_RS02995 (RMP67_02995) - 591156..591857 (-) 702 WP_044773119.1 CPBP family intramembrane glutamic endopeptidase -
  RMP67_RS03000 (RMP67_03000) scnR 592086..592736 (+) 651 WP_023371212.1 response regulator transcription factor Regulator

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26881.11 Da        Isoelectric Point: 4.7252

>NTDB_id=808828 RMP67_RS02970 WP_002943067.1 587692..588426(+) (amiE) [Streptococcus suis strain ID26102]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=808828 RMP67_RS02970 WP_002943067.1 587692..588426(+) (amiE) [Streptococcus suis strain ID26102]
ATGTCTAATGCGATTATTTCTATCAAGGATTTACATAAGTACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTGGTCGTTATTATCGGTCCATCAGGGTCAGGGAAATCGACTTTCTTACGTACAATGAACCTCT
TAGAAGTGCCAACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGT
GAAAAGATGGGAATGGTTTTTCAACAGTTCAATCTTTTTCCGAATATGACGGTATTAGATAATATTACTTTATCACCTAT
TAAGACAAAGGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCTAAGGAATTACTTGAAAAGGTAGGATTGCCAGATAAGG
CCAATGCCTATCCACAAAGCCTTTCAGGTGGTCAGCAACAACGGATCGCTATTGCACGTGGTCTGGCCATGGACCCAGAT
GTCCTACTTTTTGATGAACCGACCTCTGCACTAGACCCTGAAATGGTTGGTGAAGTTCTTGCTGTAATGCAGGATTTGGC
CAAGTCAGGGATGACCATGGTTATCGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGCGGTGTCATCGTGGAGGATGGAACGCCTGAAGAAGTCTTTGAACATACCAAGGAAGAACGGACTAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MU26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365