Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   P4829_RS02190 Genome accession   NZ_CP120846
Coordinates   444331..445281 (+) Length   316 a.a.
NCBI ID   WP_010789705.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain MBLB1156     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 439331..450281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P4829_RS02155 (P4829_02155) - 439963..440340 (-) 378 Protein_391 ABC transporter permease -
  P4829_RS02160 (P4829_02160) - 440340..440429 (+) 90 Protein_392 hypothetical protein -
  P4829_RS02165 (P4829_02165) rapC 440623..441771 (+) 1149 WP_004430265.1 tetratricopeptide repeat protein Regulator
  P4829_RS02170 (P4829_02170) phrC 441755..441874 (+) 120 WP_063638740.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  P4829_RS02175 (P4829_02175) - 442009..442116 (-) 108 WP_072053240.1 YjcZ family sporulation protein -
  P4829_RS02180 (P4829_02180) - 442320..442427 (-) 108 WP_035192051.1 YjcZ family sporulation protein -
  P4829_RS02185 (P4829_02185) - 442534..443898 (-) 1365 WP_004430267.1 aspartate kinase -
  P4829_RS02190 (P4829_02190) ceuB 444331..445281 (+) 951 WP_010789705.1 ABC transporter permease Machinery gene
  P4829_RS02195 (P4829_02195) - 445274..446221 (+) 948 WP_063638741.1 iron chelate uptake ABC transporter family permease subunit -
  P4829_RS02200 (P4829_02200) - 446215..446973 (+) 759 WP_063638742.1 ABC transporter ATP-binding protein -
  P4829_RS02205 (P4829_02205) - 446995..447948 (+) 954 WP_063638743.1 siderophore ABC transporter substrate-binding protein -
  P4829_RS02210 (P4829_02210) - 448258..449676 (-) 1419 WP_010789702.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34967.50 Da        Isoelectric Point: 9.8731

>NTDB_id=808818 P4829_RS02190 WP_010789705.1 444331..445281(+) (ceuB) [Bacillus atrophaeus strain MBLB1156]
MKLRYLVVLLILLAFCSIFIGVEDLSPLDLFHMNKEEASTLFASRLPRLISIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLIKMLIAFIFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNISSWLQGDFSLIVKGRYELLFLSIPLVIIAYVFADKFTVAGMGESFSVNLGLKYKRIVNIGLIISSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLLCDILGRIIIFPYEISIGLMVGIIGSGIFLYMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=808818 P4829_RS02190 WP_010789705.1 444331..445281(+) (ceuB) [Bacillus atrophaeus strain MBLB1156]
ATGAAGCTACGTTACTTAGTTGTTTTACTTATTTTACTTGCATTCTGTTCTATTTTTATCGGCGTAGAGGATCTGTCGCC
GCTGGATCTTTTTCATATGAATAAAGAAGAGGCTTCAACGCTTTTCGCCAGCCGTTTACCGAGATTAATAAGCATTATTA
TTGCAGGCATGAGCCTGAGCATCTGCGGTTTAATTATGCAGCAGATCAGCCGGAATAAATTCGTTTCGCCGACAACTGCC
GGCACGATGGATTGGGCGAGGCTCGGGATTTTGATTTCATTAATGCTGTTTACCTCTGCCAGTCCGCTGATAAAAATGCT
GATTGCTTTTATATTTGCGCTTGCGGGCAACTTCCTGTTCATGAAAATCCTTGAGAGAATAAAGTTTAATGATACGATCT
TTATTCCTCTCGTGGGCTTAATGCTTGGGAACATTGTCAGCTCGATTGCGACGTTTATCGCGTATAAATATGATTTAATC
CAAAATATTTCTTCATGGCTTCAAGGAGACTTCTCTCTCATTGTGAAAGGGAGATATGAACTTTTATTCTTGAGTATCCC
GCTTGTGATAATCGCATATGTATTTGCTGACAAATTCACAGTAGCAGGGATGGGGGAAAGCTTCTCCGTCAACCTTGGCC
TGAAATATAAACGGATTGTGAATATCGGGCTGATTATATCGTCGCTGATCACGTCCCTCGTGATTTTGACTGTCGGTATG
CTGCCGTTCCTTGGGCTAATCATTCCGAATATCGTATCCATTTACAGGGGAGACAACCTGAAAAGCAGCCTGCCCCACAC
AGCTCTTTTAGGCGCCGTTTTTGTGCTGCTTTGCGATATATTGGGCAGGATTATTATTTTTCCGTACGAAATCTCGATTG
GCTTGATGGTCGGAATCATCGGCAGCGGTATTTTCCTGTATATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525