Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   RPQ02_RS17920 Genome accession   NZ_CP135085
Coordinates   4020461..4021585 (+) Length   374 a.a.
NCBI ID   WP_313937906.1    Uniprot ID   -
Organism   Streptomyces sp. AM2-3-1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4015461..4026585
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RPQ02_RS17905 (RPQ02_17905) - 4016056..4016925 (+) 870 WP_313937903.1 hypothetical protein -
  RPQ02_RS17910 (RPQ02_17910) - 4016958..4018727 (-) 1770 WP_313937904.1 BACON domain-containing protein -
  RPQ02_RS17915 (RPQ02_17915) radA/sms 4018968..4020380 (+) 1413 WP_313937905.1 DNA repair protein RadA Machinery gene
  RPQ02_RS17920 (RPQ02_17920) disA 4020461..4021585 (+) 1125 WP_313937906.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  RPQ02_RS17925 (RPQ02_17925) - 4021746..4022555 (-) 810 WP_313937907.1 hypothetical protein -
  RPQ02_RS17930 (RPQ02_17930) - 4023410..4024312 (+) 903 WP_313937908.1 A/G-specific adenine glycosylase -
  RPQ02_RS17935 (RPQ02_17935) - 4024488..4025138 (+) 651 WP_313937909.1 SigE family RNA polymerase sigma factor -
  RPQ02_RS17940 (RPQ02_17940) - 4025126..4025815 (+) 690 WP_383262515.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40361.28 Da        Isoelectric Point: 4.8644

>NTDB_id=808664 RPQ02_RS17920 WP_313937906.1 4020461..4021585(+) (disA) [Streptomyces sp. AM2-3-1]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=808664 RPQ02_RS17920 WP_313937906.1 4020461..4021585(+) (disA) [Streptomyces sp. AM2-3-1]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTGATGCGCGCCTCGTT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGTGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACGAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTGCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGACCGCTGTCGCGCAGCGTCTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCCGAATACGTGGTGGAGCTGGGCACCGACGGGCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCGGAGCGAGAACTGGTCGTGCGTGACTACGTGCCGGAGCCGACGGCCAAGCGGTCGCGTACGGTCGCGGA
GGCGCTGACCGAGCTGGACGGGCTCTCGCACACCGAGCTGCTCGAACTTCCGGTCGTGGCACGGGCCCTGGGGTACAGCG
GATCACCCGAGACCCTCGACTCGGCGGTCTCGCCCCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGACTGCAGAAGCTGCTCGCAGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGAGTCGGCGAGGCACGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTCGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436