Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   RMQ63_RS06785 Genome accession   NZ_CP135063
Coordinates   1395821..1398154 (+) Length   777 a.a.
NCBI ID   WP_254457645.1    Uniprot ID   -
Organism   Streptococcus suis strain ID32563     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1390821..1403154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMQ63_RS06765 (RMQ63_06765) treP 1391638..1393620 (-) 1983 WP_254457644.1 PTS system trehalose-specific EIIBC component -
  RMQ63_RS06770 (RMQ63_06770) treR 1393853..1394566 (+) 714 WP_044683691.1 trehalose operon repressor Regulator
  RMQ63_RS06775 (RMQ63_06775) - 1394624..1394935 (+) 312 WP_002935948.1 hypothetical protein -
  RMQ63_RS06780 (RMQ63_06780) - 1394932..1395480 (+) 549 WP_002935945.1 CvpA family protein -
  RMQ63_RS06785 (RMQ63_06785) mutS/mutS2 1395821..1398154 (+) 2334 WP_254457645.1 endonuclease MutS2 Machinery gene
  RMQ63_RS06790 (RMQ63_06790) - 1398178..1398831 (+) 654 WP_105119323.1 GNAT family N-acetyltransferase -
  RMQ63_RS06795 (RMQ63_06795) trxA 1399362..1399676 (+) 315 WP_012775426.1 thioredoxin -
  RMQ63_RS06800 (RMQ63_06800) - 1399817..1401346 (+) 1530 WP_313680583.1 AMP-binding protein -
  RMQ63_RS06805 (RMQ63_06805) msrB 1401386..1402324 (+) 939 WP_313680584.1 peptide-methionine (R)-S-oxide reductase MsrB -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87553.15 Da        Isoelectric Point: 6.4820

>NTDB_id=808438 RMQ63_RS06785 WP_254457645.1 1395821..1398154(+) (mutS/mutS2) [Streptococcus suis strain ID32563]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYSNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFARDHQAVVPKLSEKQDIALLNVRHPLIAEPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVQILAEAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDTIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDLALAESEEILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMTLAKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=808438 RMQ63_RS06785 WP_254457645.1 1395821..1398154(+) (mutS/mutS2) [Streptococcus suis strain ID32563]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCACCGTATCCAACAGGCCTTCGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGGCTGCTACTAGTGACATTGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAGCTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGATTTTTATAG
TAATCTGGAAAATGTCAGTCTTAGCCAGCTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAAGGCTCCC
TCCAGTCCATCAATGATGCGGGGTTTGTAGAGGATTTTGCCTCTGAAAAACTAGCCCGTATTCGAAGAAAAATCCGTGAA
GCTGAAGACCAAGTTCGGCAGGTCATGCAGGATATTTTGAAGACCAAGGGTGACATGCTGTCCGATAGTATTTTAGCAAG
TCGTAATGGACGCAATGTCCTTCCTGTCAAAAATACCTATCGCAATAAGATTGCAGGGGTTGTCCATGACATTTCTGCTT
CTGGCTCGACTGTGTATATTGAACCGCGGGCAGTGGTGACCCTGAACGAAGAAATCAGTCACCTCCGAGCAGAAGAACGC
CACGAGCTCAACCGTATCTTGCAGGAATTGTCGGATATGCTCCGTCCACATAGTGGCGTGATTCGTAACAATGCATGGCT
TATCGGACATATTGATTTCGTCCGTGCCAAGCATCTCTTTGCGCGTGATCATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTCAACGTTCGGCATCCGCTCATTGCTGAGCCTGTACCAAATGACCTGTATTTCGGTAGTCAG
TTGACGGCTATTGTTATCACAGGTCCCAATACGGGTGGTAAGACCATTATGCTCAAGACCTTGGGATTAACGCACCTTAT
GGCTCAGTCTGGTTTGCCTATTTTGGCAGACAAGGGCAGTCGGGTGGCTATCTTCAAAGAAATTTTTGCGGATATTGGGG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGCAGATTTTAGCGGAGGCGGAT
CAAGATTCCCTCATTCTCTTTGACGAGTTGGGAGCTGGGACCGATCCGCAGGAGGGTGCATCTTTGGCAATGGCTATTTT
GGATGACCTTCGTCTGAGGGGGATCAAGACCATGGCAACCACCCACTACCCTGAGCTTAAGGCCTACGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAATTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTAGGTCTATCTGATACTATTATCCAGTCAGCCCAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATTGAGAAATTGGAAAGCCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTGGAACAAGAAAATTACAAGATGAATCGAGCCCTTCGTAAGCTCTATGACGAGCTCAATCGTGAGCGGGAAAATGAG
CTCAACAAGGCACGTTTGGAAGCCAAGGAAATTGTCGATTTGGCGTTGGCAGAAAGCGAGGAGATTCTTAAAAATCTCCA
TGCTGCAGCCAGTCTTAAGCCCCACCAGATTATCGAAGCCAAGGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGACC
TGTCTAAGAACAAAGTCTTGAAAAAAGCTAAAATTCAGAGGGAAGCCAAGGTGGGCGATGACATTATCGTTACAGCTTAT
GGACAACGCGGCACCCTGACCAATCAGCTCAAGGACGGGCGTTGGGAAGCTCAGGTTGGTTTGATTAAGATGACCTTGGC
CAAAGATGAGTTTGAGTTAGTAAAGGCGGAAAAGGCAGAGCAGCCTAAGAAACGCCAGGTTCACACAGTCAAACGTGCCA
ATGTACGAGGACCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAGCTGGATGAATTTATC
GACCAAGCCCTTCTCAACAATCTGGCACAAGTCGACATTGTCCACGGTATTGGTACAGGGGTTATCCGAGAAGGGGTGAC
CAAGTACCTTCGCCGAAACAAGCAAGTCAAGGAGTTCGGTTATGCCCCACAAAATGCAGGTGGCTCAGGCTGTACTATTG
TGACGTTTAAATAG

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.52

100

0.403