Detailed information NTG0808195

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: P0M29_RS14975
• Genome accession: NZ_CP120711
• Coordinates: 2943626..2944774 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 12Y
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2938626..2949774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P0M29_RS14955 (P0M29_14955)	-	2939026..2939709 (-)	684	WP_014416899.1	ABC transporter ATP-binding protein	-
P0M29_RS14960 (P0M29_14960)	-	2939724..2941157 (-)	1434	WP_029974314.1	ABC transporter permease	-
P0M29_RS14965 (P0M29_14965)	-	2941370..2942053 (+)	684	WP_014416901.1	response regulator transcription factor	-
P0M29_RS14970 (P0M29_14970)	-	2942040..2943473 (+)	1434	WP_103042081.1	HAMP domain-containing sensor histidine kinase	-
P0M29_RS14975 (P0M29_14975)	rapC	2943626..2944774 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
P0M29_RS14980 (P0M29_14980)	phrC	2944758..2944877 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
P0M29_RS14985 (P0M29_14985)	-	2945025..2945120 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
P0M29_RS14990 (P0M29_14990)	-	2945215..2946579 (-)	1365	WP_015239155.1	aspartate kinase	-
P0M29_RS14995 (P0M29_14995)	ceuB	2946993..2947946 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
P0M29_RS15000 (P0M29_15000)	-	2947936..2948883 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
P0M29_RS15005 (P0M29_15005)	-	2948877..2949635 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=808195 P0M29_RS14975 WP_007410270.1 2943626..2944774(+) (rapC) [Bacillus velezensis strain 12Y]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=808195 P0M29_RS14975 WP_007410270.1 2943626..2944774(+) (rapC) [Bacillus velezensis strain 12Y]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568