Detailed information NTG0080799

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: OW489_RS04925
• Genome accession: NZ_AP026446
• Coordinates: 1036169..1036720 (-)
• Length: 183 a.a.
• NCBI ID: WP_120857439.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain CHC155
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1031169..1041720

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OW489_RS04910 (CHC155_09750)	ruvC	1031873..1032346 (-)	474	WP_001221166.1	crossover junction endodeoxyribonuclease RuvC	-
OW489_RS04915 (CHC155_09760)	-	1032476..1033201 (+)	726	WP_000646759.1	NYN domain-containing protein	-
OW489_RS04920 (CHC155_09770)	-	1033716..1036118 (-)	2403	WP_267285850.1	DUF3519 domain-containing protein	-
OW489_RS04925 (CHC155_09780)	ruvA	1036169..1036720 (-)	552	WP_120857439.1	Holliday junction branch migration protein RuvA	Machinery gene
OW489_RS04930 (CHC155_09790)	-	1036746..1038590 (-)	1845	WP_267285851.1	FapA family protein	-
OW489_RS04935 (CHC155_09800)	murJ	1038683..1040143 (+)	1461	WP_267285852.1	murein biosynthesis integral membrane protein MurJ	-
OW489_RS04940 (CHC155_09810)	cysS	1040144..1041541 (+)	1398	WP_267285853.1	cysteine--tRNA ligase	-

Sequence

Protein

• Length: 183 a.a.
• Molecular weight: 20164.78 Da
• Isoelectric Point: 9.4305

>NTDB_id=80799 OW489_RS04925 WP_120857439.1 1036169..1036720(-) (ruvA) [Helicobacter pylori strain CHC155]
MIVGLIGVVEKISALEAHIEVQGVVYGVQVSMRTSALLQAGQKARLKILQVIKEDAHLLYGFLEESEKILFERLLKINGV
GGRIALAILSSFSPNEFENIIATKEVKRLQQVPGIGKKLADKIMVDLIGFFIQDETGPIRNEVFLALESLGFKNAEINKV
LKTLKPNLSTEAAIKEALQQLRS

Nucleotide

• Length: 552 bp

>NTDB_id=80799 OW489_RS04925 WP_120857439.1 1036169..1036720(-) (ruvA) [Helicobacter pylori strain CHC155]
ATGATAGTGGGTTTGATAGGGGTTGTGGAAAAAATTTCTGCTTTAGAAGCGCATATAGAAGTGCAAGGGGTTGTTTATGG
GGTGCAAGTTTCTATGCGAACTTCTGCTTTGCTTCAAGCGGGCCAAAAAGCGCGTTTGAAAATCTTACAAGTGATTAAAG
AAGATGCGCATCTTTTATACGGGTTTTTAGAAGAGAGCGAAAAAATCCTCTTTGAAAGGCTTTTAAAAATCAATGGGGTA
GGGGGGCGTATCGCTTTAGCCATTCTTTCAAGCTTTTCGCCGAATGAATTTGAAAATATTATCGCCACTAAAGAAGTCAA
AAGACTCCAGCAAGTCCCAGGCATAGGCAAAAAGCTCGCTGATAAGATCATGGTGGATTTGATTGGCTTTTTCATTCAAG
ATGAAACTGGCCCTATACGCAATGAAGTCTTTTTAGCCCTAGAGAGTTTGGGCTTTAAAAACGCTGAAATCAATAAAGTT
TTAAAAACCCTAAAACCCAATCTCAGCACCGAAGCAGCGATTAAAGAAGCCTTACAACAACTGCGCTCTTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (139-181)

• Helix-hairpin-helix domain (HHH_5) (71-127)

• RuvA N terminal domain (RuvA_N) (1-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Helicobacter pylori 26695	93.989	100	0.94
ruvA	Streptococcus pneumoniae R6	33.846	100	0.361
ruvA	Streptococcus pneumoniae D39	33.846	100	0.361