Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LHUE1_RS13080 Genome accession   NZ_CP120687
Coordinates   2834986..2836227 (-) Length   413 a.a.
NCBI ID   WP_049169461.1    Uniprot ID   -
Organism   Lacticaseibacillus huelsenbergensis strain DSM 115425     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2829986..2841227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LHUE1_RS13075 (LHUE1_002615) - 2833232..2834962 (-) 1731 WP_049169460.1 proline--tRNA ligase -
  LHUE1_RS13080 (LHUE1_002616) eeP 2834986..2836227 (-) 1242 WP_049169461.1 RIP metalloprotease RseP Regulator
  LHUE1_RS13085 (LHUE1_002617) - 2836244..2837032 (-) 789 WP_010488089.1 phosphatidate cytidylyltransferase -
  LHUE1_RS13090 (LHUE1_002618) - 2837068..2837820 (-) 753 WP_049169462.1 isoprenyl transferase -
  LHUE1_RS13095 (LHUE1_002619) frr 2838408..2838965 (-) 558 WP_010488081.1 ribosome recycling factor -
  LHUE1_RS13100 (LHUE1_002620) pyrH 2838965..2839684 (-) 720 WP_010488080.1 UMP kinase -
  LHUE1_RS13105 (LHUE1_002621) tsf 2839911..2840792 (-) 882 WP_047106254.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45292.96 Da        Isoelectric Point: 8.0451

>NTDB_id=807822 LHUE1_RS13080 WP_049169461.1 2834986..2836227(-) (eeP) [Lacticaseibacillus huelsenbergensis strain DSM 115425]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDDEDDIKPG
TMLSLILNDAGKVVRINASDKTTLEGGMPVQVSRVDLVKDLVIEGYPNGDEDALQSWQVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLLVNFAGPMNNFILAILTFIIYGLIFGVQILNTNQVGTVLPDYPAAQAGLKSNARVESIDGKKIHSFTDL
STQVSKHAGKSVMFTVKQDGKTQNIAIKPDKKGKIGVMVPVEKSPARAFTYGFTQTWDLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGLAGLLFFMGYLSLGLGISNLLPIPVLDGGKILLNLIEIIRRKPLKPETEGVVTMIGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=807822 LHUE1_RS13080 WP_049169461.1 2834986..2836227(-) (eeP) [Lacticaseibacillus huelsenbergensis strain DSM 115425]
ATGACCACAATCATTGCCTTTATTGTTATCTTCTGCATTCTTGTGGTGGTTCACGAGTTTGGCCATTTTTACTTTGCAAA
ACGCAGCGGTATTCTGGTGCGTGAATTTTCGATTGGCATGGGTCCGAAGCTTTGGGCGTCACATAAGAATAATACGACCT
ACACATTGCGCCTGTTGCCACTGGGCGGTTATGTGCGTATGGCAGGCTGGCAGGACGATGAAGATGATATCAAACCAGGC
ACGATGCTGAGCTTGATTTTGAACGATGCCGGTAAAGTTGTCCGCATTAATGCCAGTGACAAAACAACATTAGAAGGCGG
CATGCCGGTTCAGGTCAGTCGCGTCGATTTGGTCAAGGACCTTGTCATCGAAGGTTATCCGAATGGTGATGAAGATGCCT
TGCAAAGTTGGCAGGTTGATCATGACGCCACTATCATCGAAGAAGATGGCACAGAAGTCCAGATTGCGCCGGAAGACGTG
CAATTTCAAAATGCACCGGTTTGGCGGCGGCTCTTGGTCAATTTTGCCGGACCGATGAATAACTTTATTCTCGCTATTTT
GACGTTCATCATTTATGGCCTGATTTTTGGTGTGCAGATTTTGAATACCAATCAGGTTGGAACCGTTCTTCCCGATTATC
CGGCTGCTCAAGCAGGACTTAAATCGAATGCTAGGGTTGAATCCATCGATGGTAAGAAGATTCATTCATTTACGGATCTT
TCAACACAGGTCAGCAAACATGCCGGCAAATCAGTCATGTTTACTGTCAAGCAGGATGGCAAAACACAAAATATTGCGAT
TAAACCGGATAAGAAAGGTAAGATTGGCGTGATGGTGCCCGTTGAGAAGTCACCGGCGCGCGCCTTTACTTATGGGTTTA
CCCAGACATGGGACCTAGCTGTTCGCACATGGGATGTCTTGAAGTCAATGGTCACTGGTGGTTTTTCACTTAATAAGCTC
GCCGGACCAGTCGGTATTTATACTATGACCAGCCAAAGTGCTAAAGGTGGACTGGCTGGCTTGTTGTTCTTCATGGGTTA
CCTAAGCCTTGGTTTGGGCATTTCCAACCTACTGCCGATTCCGGTCTTGGACGGCGGGAAAATTCTATTAAACCTGATCG
AAATCATTCGGCGCAAGCCACTCAAACCGGAAACTGAAGGTGTGGTCACGATGATCGGTCTGGGTTTGATGGTCTTGTTG
ATGCTCGCCGTCACGATTAATGACATTATGCGTTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(206-268)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.826

100

0.504
  eeP Streptococcus thermophilus LMD-9

48.706

100

0.501