Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   P3X63_RS13350 Genome accession   NZ_CP120679
Coordinates   2591010..2592740 (-) Length   576 a.a.
NCBI ID   WP_026587801.1    Uniprot ID   A0A6I7F826
Organism   Bacillus sp. HSf4     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2586010..2597740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3X63_RS13325 (P3X63_13325) - 2586154..2586774 (-) 621 WP_035428363.1 N-acetylmuramoyl-L-alanine amidase -
  P3X63_RS13330 (P3X63_13330) - 2586810..2587118 (-) 309 WP_026587797.1 hypothetical protein -
  P3X63_RS13335 (P3X63_13335) - 2587540..2588088 (-) 549 WP_026587798.1 serine acetyltransferase -
  P3X63_RS13340 (P3X63_13340) spo0A 2588455..2589255 (-) 801 WP_277691008.1 sporulation transcription factor Spo0A Regulator
  P3X63_RS13345 (P3X63_13345) spoIVB 2589546..2590829 (-) 1284 WP_026587800.1 SpoIVB peptidase -
  P3X63_RS13350 (P3X63_13350) recN 2591010..2592740 (-) 1731 WP_026587801.1 DNA repair protein RecN Machinery gene
  P3X63_RS13355 (P3X63_13355) argR 2592770..2593219 (-) 450 WP_026587802.1 transcriptional regulator ArgR -
  P3X63_RS13360 (P3X63_13360) - 2593326..2594171 (-) 846 WP_026587803.1 TlyA family RNA methyltransferase -
  P3X63_RS13365 (P3X63_13365) dxs 2594168..2596069 (-) 1902 WP_026587804.1 1-deoxy-D-xylulose-5-phosphate synthase -
  P3X63_RS13370 (P3X63_13370) - 2596331..2597221 (-) 891 WP_277691010.1 polyprenyl synthetase family protein -
  P3X63_RS13375 (P3X63_13375) - 2597211..2597471 (-) 261 WP_026587806.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 576 a.a.        Molecular weight: 64221.01 Da        Isoelectric Point: 4.8449

>NTDB_id=807666 P3X63_RS13350 WP_026587801.1 2591010..2592740(-) (recN) [Bacillus sp. HSf4]
MLAELSIKNFAIIEELTISFEKGLTVLTGETGAGKSIIIDAVSLLVGGRGSSEYVRYGEKRAELEGLFLLDSGHPVFDLC
AELGIEASDDMIVMRRDINANGKSICRVNGKLVTIAALREVGRLLLDIHGQHDNQLLMEDDQHLQLLDRYAGEEIDKALK
AYQEVYDRYMNVVKKVKQLSESEQEMAHRLDLIQFQLDEIESANLQPKEDELLQEERQQIANYEKIYEGLQHAYNALRNE
QAGLDWVGMASSELENVSEINGGLKKISESVANAYYILEDSTFQIRNMLDELEYDPERLDFIESRLNEIKQLKRKYGATV
EDIQAYSAKIEEEIDRIQNRDSHLQALKAELESVGKDVAIEAVNVSDIRKSWAKKLAGQIQQELKELYMEKSTFDTQFQI
KTADARDDAPTVNGVPVQLTKQGIDSVRFLISTNTGEPLKSLSKVASGGELSRIMLAMKSIFSAQQDVTSIIFDEVDTGV
SGRVAQAIAEKIHRVSIGSQVLCITHLPQVAAMADTHLLITKQSKSGRTTTSVTPLSKQEKIAEIGRMIAGVEVTDLTKR
HAKELLHQAKLVKTGG

Nucleotide


Download         Length: 1731 bp        

>NTDB_id=807666 P3X63_RS13350 WP_026587801.1 2591010..2592740(-) (recN) [Bacillus sp. HSf4]
TTGTTAGCTGAATTATCGATCAAAAACTTTGCCATTATTGAAGAGTTAACCATTTCATTTGAAAAAGGGCTTACTGTATT
AACCGGAGAGACTGGAGCTGGAAAATCGATCATCATTGATGCAGTATCGTTGCTTGTCGGGGGCAGAGGGTCGAGTGAAT
ATGTCAGATATGGAGAGAAAAGGGCCGAATTAGAAGGGTTGTTTCTGCTTGACAGCGGACATCCCGTTTTTGATCTCTGC
GCCGAACTTGGAATTGAAGCCTCGGATGATATGATCGTTATGAGAAGAGATATTAATGCAAACGGCAAAAGCATCTGCCG
CGTCAATGGAAAACTTGTGACGATCGCAGCTCTCAGGGAAGTCGGCAGACTTTTATTGGACATCCACGGCCAGCACGACA
ACCAGCTTCTAATGGAAGATGATCAGCATCTTCAGCTGTTGGACAGATATGCGGGCGAAGAAATTGATAAGGCATTAAAA
GCTTACCAAGAAGTATACGACCGCTATATGAATGTCGTCAAAAAGGTCAAGCAGCTTTCTGAAAGCGAACAGGAAATGGC
GCACCGGCTCGATTTGATTCAATTTCAGCTTGATGAAATCGAATCCGCCAATCTTCAGCCGAAAGAAGACGAACTGCTGC
AAGAAGAACGCCAGCAAATTGCCAATTATGAGAAAATATATGAAGGGCTTCAGCATGCCTATAACGCCCTGCGCAATGAG
CAAGCCGGGCTCGATTGGGTCGGGATGGCCTCAAGCGAGCTTGAGAATGTATCAGAGATCAATGGCGGGCTCAAAAAAAT
CTCTGAGTCAGTGGCGAATGCCTATTACATTCTTGAGGATTCAACATTTCAGATCAGAAACATGCTCGATGAATTGGAAT
ATGATCCCGAACGGCTTGATTTCATCGAATCACGCTTGAATGAAATCAAGCAGCTGAAACGGAAATACGGCGCCACTGTC
GAAGACATACAAGCCTACTCAGCCAAAATAGAGGAAGAGATCGACCGCATTCAAAATCGCGACAGCCATCTTCAGGCATT
AAAGGCAGAGCTTGAATCAGTCGGCAAAGATGTTGCGATTGAAGCGGTAAATGTCTCAGACATTCGTAAATCATGGGCGA
AGAAGCTCGCCGGACAAATCCAGCAGGAGCTCAAAGAGCTTTATATGGAAAAATCGACATTTGATACACAATTTCAAATC
AAAACGGCAGATGCCCGCGATGACGCTCCTACCGTCAACGGCGTACCCGTCCAGCTGACGAAACAAGGCATTGACAGCGT
TCGCTTCTTAATATCGACAAATACGGGAGAACCGCTCAAATCCTTATCAAAAGTCGCTTCAGGAGGAGAATTGTCAAGGA
TCATGCTGGCGATGAAAAGCATTTTCTCCGCGCAGCAGGACGTCACTTCGATCATTTTTGATGAAGTGGACACAGGTGTC
AGCGGAAGAGTGGCCCAGGCGATTGCTGAAAAAATCCACCGTGTTTCAATCGGTTCACAAGTGCTGTGCATCACCCATTT
GCCGCAAGTGGCCGCCATGGCGGATACCCACCTTTTGATCACGAAGCAATCGAAATCCGGAAGGACGACGACGAGCGTCA
CTCCGCTGTCAAAACAGGAAAAAATAGCTGAGATCGGCCGGATGATCGCCGGCGTTGAAGTGACAGATTTGACAAAACGC
CACGCCAAAGAGCTTCTGCATCAAGCAAAACTTGTCAAAACGGGCGGATAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-525)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7F826

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

80.382

100

0.804