Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | P3X63_RS00600 | Genome accession | NZ_CP120679 |
| Coordinates | 108738..111170 (+) | Length | 810 a.a. |
| NCBI ID | WP_026586092.1 | Uniprot ID | A0A6I7FIH8 |
| Organism | Bacillus sp. HSf4 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 103738..116170
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P3X63_RS00585 (P3X63_00585) | - | 106611..107075 (+) | 465 | WP_026586095.1 | CtsR family transcriptional regulator | - |
| P3X63_RS00590 (P3X63_00590) | - | 107090..107650 (+) | 561 | WP_026586094.1 | UvrB/UvrC motif-containing protein | - |
| P3X63_RS00595 (P3X63_00595) | - | 107650..108741 (+) | 1092 | WP_026586093.1 | protein arginine kinase | - |
| P3X63_RS00600 (P3X63_00600) | clpC | 108738..111170 (+) | 2433 | WP_026586092.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| P3X63_RS00605 (P3X63_00605) | radA | 111248..112627 (+) | 1380 | WP_277692245.1 | DNA repair protein RadA | Machinery gene |
| P3X63_RS00610 (P3X63_00610) | disA | 112631..113707 (+) | 1077 | WP_026586090.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| P3X63_RS00615 (P3X63_00615) | - | 113814..114902 (+) | 1089 | WP_026586089.1 | PIN/TRAM domain-containing protein | - |
| P3X63_RS00620 (P3X63_00620) | ispD | 114917..115612 (+) | 696 | WP_026586088.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| P3X63_RS00625 (P3X63_00625) | ispF | 115605..116081 (+) | 477 | WP_026586087.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90276.89 Da Isoelectric Point: 5.9553
>NTDB_id=807637 P3X63_RS00600 WP_026586092.1 108738..111170(+) (clpC) [Bacillus sp. HSf4]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGAASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVEDIAMVV
SSWTGVPVSKIAQTETDKLLNMEQILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQTYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSEQLTKRLKEQDLSIELTEAAKEKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIEKGQHIVLDVDNGE
FVVKTEAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGAASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVEDIAMVV
SSWTGVPVSKIAQTETDKLLNMEQILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQTYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSEQLTKRLKEQDLSIELTEAAKEKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIEKGQHIVLDVDNGE
FVVKTEAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=807637 P3X63_RS00600 WP_026586092.1 108738..111170(+) (clpC) [Bacillus sp. HSf4]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAAGCTCTGCGTCTCGGCCATAA
TAACATTGGGACAGAACATATTCTCCTCGGCCTTGTTCGTGAGGGTGAGGGCATTGCCGCAAAGGCGCTTCAGGCATTGG
GGCTCAGCCCCGACAAAATTCAAAAAGAGGTTGAAAGCCTGATCGGCCGCGGGCAGGAAATGTCCCAATCCATCCACTAC
ACACCAAGAGCCAAAAAAGTGACCGAACTTGCCATGGATGAGGCAAGAAAGCTGGGGCACTCATACGTGGGAACCGAACA
CATCCTCTTGGGCTTAATTCGCGAAGGAGAAGGCGTAGCAGCGAGAGTGCTGAACAATTTAGGGGTCAGCTTAAATAAAG
CGAGACAGCAAGTATTGCAGCTTTTGGGCAGCAATGAGAGCGGAGGCGCCGCGTCGGGGGCGAACAGCAATGCCAATACA
CCTACCTTAGACAGCCTTGCCCGCGATTTGACGGCGATTGCCAAAGAAGACAGCCTTGATCCCGTTATCGGCCGGAGCAA
AGAAATTCAGCGCGTCATTGAAGTGCTGAGCAGAAGAACAAAAAACAATCCCGTGTTAATCGGGGAGCCTGGTGTCGGTA
AAACAGCGATAGCCGAAGGCTTGGCCCAGCAGATCATCAACAACGAAGTGCCGGAAATTTTACGCGACAAACGCGTTATG
ACGCTTGATATGGGCACTGTCGTTGCAGGTACGAAATACCGCGGGGAATTTGAAGACCGCCTTAAAAAAGTGATGGATGA
AATCCGCCAGGCCGGCAATATCATCTTATTTATCGATGAATTGCATACGTTGATCGGCGCTGGAGGTGCGGAAGGAGCAA
TCGATGCCTCCAATATCCTGAAGCCGTCGCTTGCTCGGGGAGAACTGCAATGCATCGGGGCGACAACCCTTGATGAATAT
AGAAAATACATTGAAAAAGACGCTGCGCTTGAACGCCGTTTTCAGCCGATTCAAGTCGATCAGCCGTCACCTGAAGAAAG
CATTCAGATTTTAAGAGGGCTGAGAGACCGCTATGAGGCACACCATCGCGTATCGATCACCGATGAAGCGATCGAAGCAG
CCGTGAAGCTGTCAGACCGCTATATTTCAGACCGGTTCCTGCCTGACAAAGCGATCGATTTAATCGATGAGGCCGGTTCA
AAAGTTCGCCTGCGTTCCTTCACAACGCCTCCTAATTTAAAAGAGCTTGAACAAAAGCTTGATGAGGTGCGCAAAGAAAA
AGATGCCGCCGTCCAAAGCCAGGAATTTGAGAAAGCAGCATCTCTGCGTGATACAGAACAGCGCCTGAGGGAACAGGTTG
AAGAAACAAAGAAAACTTGGAAAGAAAAGCAAGGGCAAGAAAACTCCGAAGTAACAGTTGAGGATATCGCGATGGTCGTA
TCAAGCTGGACCGGGGTGCCGGTTTCAAAAATCGCCCAGACGGAAACAGATAAGCTCCTGAATATGGAACAAATTCTTCA
TTCACGGGTAATCGGCCAGGATGAAGCGGTTGTTGCCGTTGCCAAAGCTGTCAGACGGGCGCGGGCCGGACTAAAAGATC
CGAAACGTCCGATCGGTTCATTTATTTTCCTCGGTCCGACAGGTGTCGGTAAAACAGAGCTTGCCCGCGCACTTGCGGAA
TCTATTTTTGGTGATGAAGAAGCGATGATTCGCATTGACATGTCTGAGTACATGGAGAAGCACTCCACATCAAGACTAGT
CGGTTCGCCTCCTGGATATGTCGGCTATGATGAAGGCGGACAGCTGACGGAAAAAGTAAGAAGAAAACCTTATTCAGTCG
TCTTGCTTGATGAGATTGAAAAAGCGCACCCTGACGTTTTTAACATTCTGCTTCAAGTTCTCGAGGATGGACGCCTGACT
GATTCAAAAGGCCGCACCGTAGACTTTAGAAATACGATTCTCATCATGACTTCCAACGTAGGAGCCAGCGAGCTGAGAAG
AAATAAATACGTCGGTTTTAACGTGCAGGATGAGACCCAGACTTACAAAGATATGAAAGATAAGGTCATGGGCGAATTAA
AACGCGCTTTCAGACCGGAGTTTATTAACCGGATAGATGAGATCATCGTCTTCCACTCTCTGGAGAAAAAACATCTGAAG
GACATTGTCTCCCTCATGTCAGAGCAATTGACCAAACGTCTGAAAGAACAGGATCTTTCAATCGAGCTGACAGAAGCGGC
TAAAGAAAAAATCGCTGAAGAAGGAGTCGACCTTGAGTACGGCGCCCGTCCACTCAGAAGGGCCATCCAAAAACACGTCG
AAGACCGTCTGTCTGAGGAACTTCTGAAAGGTCATATTGAAAAAGGCCAGCATATTGTTCTCGATGTAGATAACGGAGAA
TTTGTCGTAAAAACAGAAGCGAAAACGAACTAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAAGCTCTGCGTCTCGGCCATAA
TAACATTGGGACAGAACATATTCTCCTCGGCCTTGTTCGTGAGGGTGAGGGCATTGCCGCAAAGGCGCTTCAGGCATTGG
GGCTCAGCCCCGACAAAATTCAAAAAGAGGTTGAAAGCCTGATCGGCCGCGGGCAGGAAATGTCCCAATCCATCCACTAC
ACACCAAGAGCCAAAAAAGTGACCGAACTTGCCATGGATGAGGCAAGAAAGCTGGGGCACTCATACGTGGGAACCGAACA
CATCCTCTTGGGCTTAATTCGCGAAGGAGAAGGCGTAGCAGCGAGAGTGCTGAACAATTTAGGGGTCAGCTTAAATAAAG
CGAGACAGCAAGTATTGCAGCTTTTGGGCAGCAATGAGAGCGGAGGCGCCGCGTCGGGGGCGAACAGCAATGCCAATACA
CCTACCTTAGACAGCCTTGCCCGCGATTTGACGGCGATTGCCAAAGAAGACAGCCTTGATCCCGTTATCGGCCGGAGCAA
AGAAATTCAGCGCGTCATTGAAGTGCTGAGCAGAAGAACAAAAAACAATCCCGTGTTAATCGGGGAGCCTGGTGTCGGTA
AAACAGCGATAGCCGAAGGCTTGGCCCAGCAGATCATCAACAACGAAGTGCCGGAAATTTTACGCGACAAACGCGTTATG
ACGCTTGATATGGGCACTGTCGTTGCAGGTACGAAATACCGCGGGGAATTTGAAGACCGCCTTAAAAAAGTGATGGATGA
AATCCGCCAGGCCGGCAATATCATCTTATTTATCGATGAATTGCATACGTTGATCGGCGCTGGAGGTGCGGAAGGAGCAA
TCGATGCCTCCAATATCCTGAAGCCGTCGCTTGCTCGGGGAGAACTGCAATGCATCGGGGCGACAACCCTTGATGAATAT
AGAAAATACATTGAAAAAGACGCTGCGCTTGAACGCCGTTTTCAGCCGATTCAAGTCGATCAGCCGTCACCTGAAGAAAG
CATTCAGATTTTAAGAGGGCTGAGAGACCGCTATGAGGCACACCATCGCGTATCGATCACCGATGAAGCGATCGAAGCAG
CCGTGAAGCTGTCAGACCGCTATATTTCAGACCGGTTCCTGCCTGACAAAGCGATCGATTTAATCGATGAGGCCGGTTCA
AAAGTTCGCCTGCGTTCCTTCACAACGCCTCCTAATTTAAAAGAGCTTGAACAAAAGCTTGATGAGGTGCGCAAAGAAAA
AGATGCCGCCGTCCAAAGCCAGGAATTTGAGAAAGCAGCATCTCTGCGTGATACAGAACAGCGCCTGAGGGAACAGGTTG
AAGAAACAAAGAAAACTTGGAAAGAAAAGCAAGGGCAAGAAAACTCCGAAGTAACAGTTGAGGATATCGCGATGGTCGTA
TCAAGCTGGACCGGGGTGCCGGTTTCAAAAATCGCCCAGACGGAAACAGATAAGCTCCTGAATATGGAACAAATTCTTCA
TTCACGGGTAATCGGCCAGGATGAAGCGGTTGTTGCCGTTGCCAAAGCTGTCAGACGGGCGCGGGCCGGACTAAAAGATC
CGAAACGTCCGATCGGTTCATTTATTTTCCTCGGTCCGACAGGTGTCGGTAAAACAGAGCTTGCCCGCGCACTTGCGGAA
TCTATTTTTGGTGATGAAGAAGCGATGATTCGCATTGACATGTCTGAGTACATGGAGAAGCACTCCACATCAAGACTAGT
CGGTTCGCCTCCTGGATATGTCGGCTATGATGAAGGCGGACAGCTGACGGAAAAAGTAAGAAGAAAACCTTATTCAGTCG
TCTTGCTTGATGAGATTGAAAAAGCGCACCCTGACGTTTTTAACATTCTGCTTCAAGTTCTCGAGGATGGACGCCTGACT
GATTCAAAAGGCCGCACCGTAGACTTTAGAAATACGATTCTCATCATGACTTCCAACGTAGGAGCCAGCGAGCTGAGAAG
AAATAAATACGTCGGTTTTAACGTGCAGGATGAGACCCAGACTTACAAAGATATGAAAGATAAGGTCATGGGCGAATTAA
AACGCGCTTTCAGACCGGAGTTTATTAACCGGATAGATGAGATCATCGTCTTCCACTCTCTGGAGAAAAAACATCTGAAG
GACATTGTCTCCCTCATGTCAGAGCAATTGACCAAACGTCTGAAAGAACAGGATCTTTCAATCGAGCTGACAGAAGCGGC
TAAAGAAAAAATCGCTGAAGAAGGAGTCGACCTTGAGTACGGCGCCCGTCCACTCAGAAGGGCCATCCAAAAACACGTCG
AAGACCGTCTGTCTGAGGAACTTCTGAAAGGTCATATTGAAAAAGGCCAGCATATTGTTCTCGATGTAGATAACGGAGAA
TTTGTCGTAAAAACAGAAGCGAAAACGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
95.679 |
100 |
0.957 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.248 |
99.506 |
0.5 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.723 |
100 |
0.475 |
| clpC | Streptococcus thermophilus LMD-9 |
46.602 |
100 |
0.474 |
| clpC | Streptococcus pneumoniae Rx1 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae D39 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus mutans UA159 |
44.217 |
100 |
0.453 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.536 |
88.519 |
0.43 |
| clpE | Streptococcus mutans UA159 |
53.467 |
80.123 |
0.428 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.08 |
80.123 |
0.417 |
| clpE | Streptococcus pneumoniae Rx1 |
52.08 |
80.123 |
0.417 |
| clpE | Streptococcus pneumoniae D39 |
52.08 |
80.123 |
0.417 |
| clpE | Streptococcus pneumoniae R6 |
52.08 |
80.123 |
0.417 |