Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | HXS57_RS00835 | Genome accession | NZ_AP023039 |
| Coordinates | 150820..151215 (-) | Length | 131 a.a. |
| NCBI ID | WP_006563893.1 | Uniprot ID | A0A6J4CVV1 |
| Organism | Helicobacter suis strain NHP19-4003 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 145820..156215
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXS57_RS00810 (NHP194003_01630) | - | 146009..146692 (+) | 684 | WP_006563897.1 | response regulator transcription factor | - |
| HXS57_RS00815 (NHP194003_01640) | - | 146694..147974 (+) | 1281 | WP_176485784.1 | ArsS family sensor histidine kinase | - |
| HXS57_RS00820 (NHP194003_01650) | - | 147971..149152 (+) | 1182 | WP_104685875.1 | amidophosphoribosyltransferase | - |
| HXS57_RS00825 (NHP194003_01660) | hemB | 149145..150116 (+) | 972 | WP_040499055.1 | porphobilinogen synthase | - |
| HXS57_RS00830 (NHP194003_01670) | - | 150116..150838 (+) | 723 | WP_006563894.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| HXS57_RS00835 (NHP194003_01680) | dprB | 150820..151215 (-) | 396 | WP_006563893.1 | Holliday junction resolvase RuvX | Machinery gene |
| HXS57_RS00840 (NHP194003_01690) | dprA | 151212..152021 (-) | 810 | WP_006563892.1 | DNA-processing protein DprA | Machinery gene |
| HXS57_RS00845 (NHP194003_01700) | minE | 152009..152266 (-) | 258 | WP_034376430.1 | cell division topological specificity factor MinE | - |
| HXS57_RS00850 (NHP194003_01710) | minD | 152263..153063 (-) | 801 | WP_006563890.1 | septum site-determining protein MinD | - |
| HXS57_RS00855 (NHP194003_01720) | ilvC | 153072..154052 (-) | 981 | WP_006565235.1 | ketol-acid reductoisomerase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14821.61 Da Isoelectric Point: 10.1350
>NTDB_id=80763 HXS57_RS00835 WP_006563893.1 150820..151215(-) (dprB) [Helicobacter suis strain NHP19-4003]
MIIACDIGLKRIGLAIYAQKIILPLNSIKRINRKQASLELLHLLETKKATKLIVGLPHACYTTRQRVLHFINLLNFAPVI
YVEEDNSSVEALTNLWHLSSKKRQKASKDGALDSLAACEILRRYLAQEMLV
MIIACDIGLKRIGLAIYAQKIILPLNSIKRINRKQASLELLHLLETKKATKLIVGLPHACYTTRQRVLHFINLLNFAPVI
YVEEDNSSVEALTNLWHLSSKKRQKASKDGALDSLAACEILRRYLAQEMLV
Nucleotide
Download Length: 396 bp
>NTDB_id=80763 HXS57_RS00835 WP_006563893.1 150820..151215(-) (dprB) [Helicobacter suis strain NHP19-4003]
ATGATCATCGCTTGTGATATTGGGCTTAAACGAATCGGTCTTGCGATTTATGCACAAAAAATTATTCTGCCCCTTAATTC
CATTAAACGGATTAATCGCAAACAAGCTAGTTTAGAATTACTCCATTTGCTAGAAACTAAAAAGGCCACAAAACTCATCG
TCGGATTGCCCCATGCCTGCTACACCACACGCCAACGCGTTTTACATTTTATTAATCTACTTAACTTTGCGCCTGTGATT
TATGTTGAGGAAGATAATAGCAGTGTAGAGGCGCTTACTAATCTTTGGCATTTATCTAGCAAAAAACGCCAAAAAGCCAG
CAAAGACGGCGCACTAGATAGTTTGGCTGCCTGTGAGATTTTAAGGCGCTATCTAGCTCAAGAAATGTTGGTATAA
ATGATCATCGCTTGTGATATTGGGCTTAAACGAATCGGTCTTGCGATTTATGCACAAAAAATTATTCTGCCCCTTAATTC
CATTAAACGGATTAATCGCAAACAAGCTAGTTTAGAATTACTCCATTTGCTAGAAACTAAAAAGGCCACAAAACTCATCG
TCGGATTGCCCCATGCCTGCTACACCACACGCCAACGCGTTTTACATTTTATTAATCTACTTAACTTTGCGCCTGTGATT
TATGTTGAGGAAGATAATAGCAGTGTAGAGGCGCTTACTAATCTTTGGCATTTATCTAGCAAAAAACGCCAAAAAGCCAG
CAAAGACGGCGCACTAGATAGTTTGGCTGCCTGTGAGATTTTAAGGCGCTATCTAGCTCAAGAAATGTTGGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
51.587 |
96.183 |
0.496 |