Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   P3T70_RS06870 Genome accession   NZ_CP120668
Coordinates   1364487..1365758 (-) Length   423 a.a.
NCBI ID   WP_277705180.1    Uniprot ID   -
Organism   Limosilactobacillus fermentum strain CYLB55     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1359487..1370758
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3T70_RS06865 (P3T70_06865) - 1362732..1364453 (-) 1722 WP_277705179.1 proline--tRNA ligase -
  P3T70_RS06870 (P3T70_06870) eeP 1364487..1365758 (-) 1272 WP_277705180.1 RIP metalloprotease RseP Regulator
  P3T70_RS06875 (P3T70_06875) - 1365780..1366568 (-) 789 WP_012391092.1 phosphatidate cytidylyltransferase -
  P3T70_RS06880 (P3T70_06880) - 1366585..1367352 (-) 768 WP_015638805.1 isoprenyl transferase -
  P3T70_RS06885 (P3T70_06885) frr 1367485..1368045 (-) 561 WP_003685219.1 ribosome recycling factor -
  P3T70_RS06890 (P3T70_06890) pyrH 1368045..1368770 (-) 726 WP_277705181.1 UMP kinase -
  P3T70_RS06895 (P3T70_06895) tsf 1368851..1369729 (-) 879 WP_003681955.1 translation elongation factor Ts -
  P3T70_RS06900 (P3T70_06900) rpsB 1369820..1370599 (-) 780 WP_003681957.1 30S ribosomal protein S2 -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 46176.56 Da        Isoelectric Point: 6.6202

>NTDB_id=807565 P3T70_RS06870 WP_277705180.1 1364487..1365758(-) (eeP) [Limosilactobacillus fermentum strain CYLB55]
MIITIITFIIVFGILVLVHEFGHYYFAKRAGILVREFSIGMGPKVWWRRSNGTTYTIRILPLGGYVRLAGADEDEDELRP
GTPVTLQTNEEGKVTLINASEKETLLEGIPLRIVDSDLEDKLIISGYENDDEETVKTYPVDHDATIVERDGTEVRIAPKD
VQFQSASLPARMMTNFAGPMNNFILSLLVFIILGFTLSGIPTNSNVLGGVTKDSVAAKAGLVSGDKITRVATTKVSTWND
ISQAISPNPGKKLAVTYQRNGKTYHTTVTPKATKQGSQTVGMIGIREEEKFDPVARINYGWRQFITAGTLIFAVLGHMIT
HGFSLNDLGGPVAIYAGTSQATSLGINGILAFLAMLSINLGIVNLIPIPALDGGKLILNIVEGIIRRPISEKVEGILNLA
GFALLMILMVLVTYNDIQRYFIH

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=807565 P3T70_RS06870 WP_277705180.1 1364487..1365758(-) (eeP) [Limosilactobacillus fermentum strain CYLB55]
TTGATCATCACCATCATTACTTTTATCATCGTCTTCGGAATCCTGGTGCTCGTTCACGAATTCGGCCACTACTACTTTGC
CAAGCGGGCCGGGATTTTAGTACGCGAGTTTTCGATTGGGATGGGGCCCAAGGTTTGGTGGCGGCGTTCAAACGGGACGA
CCTACACCATCCGGATCCTGCCGCTTGGGGGTTACGTCCGCCTGGCCGGGGCCGATGAAGATGAAGACGAACTCCGTCCC
GGGACGCCGGTGACCTTGCAAACCAATGAGGAAGGCAAGGTGACCCTGATCAACGCCAGCGAAAAGGAAACCCTGTTGGA
GGGGATTCCGCTGCGGATCGTTGACAGCGACCTGGAGGATAAGTTAATCATCTCCGGGTACGAAAATGATGATGAAGAAA
CCGTCAAGACCTACCCGGTTGATCACGACGCGACGATCGTCGAACGGGACGGGACCGAGGTGCGGATCGCCCCCAAGGAC
GTTCAGTTCCAATCGGCCAGCTTACCGGCGCGGATGATGACCAACTTTGCCGGGCCAATGAACAACTTCATCTTGTCCCT
GCTGGTCTTCATCATCCTGGGCTTTACCCTGAGCGGGATCCCCACCAACTCCAACGTTTTGGGCGGGGTGACCAAGGATT
CGGTGGCTGCCAAGGCCGGCCTGGTGAGCGGCGATAAAATTACCAGGGTGGCGACGACCAAGGTCAGCACCTGGAACGAT
ATTTCCCAGGCAATTTCCCCTAACCCGGGGAAGAAGCTCGCCGTTACCTACCAGCGCAATGGCAAGACCTACCACACCAC
CGTGACGCCTAAGGCCACCAAACAGGGGAGCCAAACGGTTGGGATGATCGGGATCAGAGAAGAGGAGAAGTTTGATCCGG
TCGCCCGCATTAACTACGGCTGGCGCCAATTTATCACCGCCGGCACCCTGATCTTTGCGGTGCTCGGCCACATGATTACG
CACGGCTTTAGCTTAAACGACCTGGGGGGGCCGGTGGCAATTTACGCCGGCACCTCGCAGGCCACCTCGTTAGGGATTAA
CGGCATCCTCGCCTTCTTGGCGATGCTGTCGATTAACCTAGGGATCGTTAACCTGATTCCGATCCCGGCCTTAGACGGGG
GGAAACTCATCTTAAACATTGTCGAAGGCATCATTCGCCGGCCAATTTCCGAAAAAGTGGAGGGGATTTTGAATTTGGCT
GGCTTTGCCCTCTTGATGATCCTGATGGTCCTTGTGACCTATAACGACATTCAACGCTACTTTATCCATTAA

Domains


Predicted by InterproScan.

(209-269)

(7-408)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.349

100

0.485

  eeP Streptococcus thermophilus LMD-9

48.349

100

0.485