Detailed information NTG0807438

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: P6S76_RS16390
• Genome accession: NZ_CP120641
• Coordinates: 3379679..3380842 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain YL2021
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3374679..3385842

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P6S76_RS16360	-	3374943..3375362 (-)	420	WP_007407479.1	TIGR03826 family flagellar region protein	-
P6S76_RS16365	comFC	3375436..3376125 (-)	690	WP_197061611.1	phosphoribosyltransferase family protein	Machinery gene
P6S76_RS16370	-	3376131..3376415 (-)	285	WP_007407481.1	competence protein ComFB	-
P6S76_RS16375	comFA	3376473..3377858 (-)	1386	WP_007407482.1	DEAD/DEAH box helicase	Machinery gene
P6S76_RS16380	-	3377967..3378815 (-)	849	WP_007407483.1	DegV family protein	-
P6S76_RS16385	degU	3378913..3379602 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
P6S76_RS16390	degS	3379679..3380842 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
P6S76_RS16395	-	3381065..3381712 (+)	648	WP_007407485.1	YigZ family protein	-
P6S76_RS16400	-	3381717..3382937 (+)	1221	WP_007407486.1	LCP family protein	-
P6S76_RS16405	-	3383036..3384112 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
P6S76_RS16410	-	3384245..3385441 (-)	1197	WP_007407487.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=807438 P6S76_RS16390 WP_007407484.1 3379679..3380842(-) (degS) [Bacillus velezensis strain YL2021]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=807438 P6S76_RS16390 WP_007407484.1 3379679..3380842(-) (degS) [Bacillus velezensis strain YL2021]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCTTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
ATCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951