Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   P6S76_RS07115 Genome accession   NZ_CP120641
Coordinates   1401865..1402461 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain YL2021     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1396865..1407461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P6S76_RS07085 - 1397077..1397532 (+) 456 WP_007409622.1 flavodoxin -
  P6S76_RS07090 dapD 1397614..1398324 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  P6S76_RS07095 - 1398395..1399519 (+) 1125 WP_007409624.1 N-acetyldiaminopimelate deacetylase -
  P6S76_RS07100 - 1399580..1399825 (+) 246 WP_003154596.1 YkuS family protein -
  P6S76_RS07105 - 1399859..1400665 (-) 807 WP_007409625.1 mechanosensitive ion channel family protein -
  P6S76_RS07110 - 1400954..1401412 (+) 459 WP_007409626.1 TlpA disulfide reductase family protein -
  P6S76_RS07115 rok 1401865..1402461 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  P6S76_RS07120 - 1402482..1403474 (-) 993 WP_007409627.1 hypothetical protein -
  P6S76_RS07125 - 1403620..1404222 (+) 603 WP_007409628.1 molybdenum cofactor guanylyltransferase -
  P6S76_RS07130 - 1404274..1405293 (+) 1020 WP_007409629.1 molybdopterin-synthase adenylyltransferase MoeB -
  P6S76_RS07135 glp 1405311..1406603 (+) 1293 WP_007409630.1 gephyrin-like molybdotransferase Glp -
  P6S76_RS07140 mobB 1406564..1407085 (+) 522 WP_007409631.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=807401 P6S76_RS07115 WP_003154591.1 1401865..1402461(+) (rok) [Bacillus velezensis strain YL2021]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=807401 P6S76_RS07115 WP_003154591.1 1401865..1402461(+) (rok) [Bacillus velezensis strain YL2021]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATTAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843