Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   RL452_RS06390 Genome accession   NZ_CP134620
Coordinates   1313282..1313905 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain Sa9     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1308282..1318905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RL452_RS06370 (RL452_06365) rpmG 1309858..1310007 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  RL452_RS06375 (RL452_06370) rpsN 1310461..1310730 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  RL452_RS06380 (RL452_06375) guaC 1310887..1311864 (+) 978 WP_000688119.1 GMP reductase -
  RL452_RS06385 (RL452_06380) - 1311886..1312902 (+) 1017 WP_172452844.1 CAP domain-containing protein -
  RL452_RS06390 (RL452_06385) dinR/lexA 1313282..1313905 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  RL452_RS06395 (RL452_06390) sosA 1314048..1314281 (+) 234 WP_000499653.1 DNA damage-induced cell division inhibitor SosA -
  RL452_RS06400 (RL452_06395) - 1314418..1314657 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  RL452_RS06405 (RL452_06400) recP/tkt 1314778..1316766 (+) 1989 WP_000481453.1 transketolase Machinery gene
  RL452_RS06410 (RL452_06405) - 1317044..1317286 (+) 243 WP_000246909.1 YneF family protein -
  RL452_RS06415 (RL452_06410) - 1317273..1317371 (+) 99 WP_001789897.1 hypothetical protein -
  RL452_RS06420 (RL452_06415) - 1317465..1317932 (+) 468 WP_338597653.1 CcdC protein domain-containing protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=807136 RL452_RS06390 WP_001208755.1 1313282..1313905(-) (dinR/lexA) [Staphylococcus aureus strain Sa9]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=807136 RL452_RS06390 WP_001208755.1 1313282..1313905(-) (dinR/lexA) [Staphylococcus aureus strain Sa9]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACATAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657