Detailed information NTG0807082

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: P5657_RS18450
• Genome accession: NZ_CP120621
• Coordinates: 3474221..3475174 (-)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain DSM 13019
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3469221..3480174

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5657_RS18420 (P5657_18420)	appD	3469343..3470329 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
P5657_RS18425 (P5657_18425)	yjaZ	3470521..3471306 (-)	786	WP_021479557.1	DUF2268 domain-containing protein	-
P5657_RS18430 (P5657_18430)	fabF	3471382..3472623 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
P5657_RS18435 (P5657_18435)	fabH	3472646..3473584 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
P5657_RS18440 (P5657_18440)	yjzB	3473749..3473985 (+)	237	WP_072173825.1	spore coat protein YjzB	-
P5657_RS18445 (P5657_18445)	comZ	3474015..3474206 (-)	192	WP_038828822.1	ComG operon transcriptional repressor ComZ	Regulator
P5657_RS18450 (P5657_18450)	med	3474221..3475174 (-)	954	WP_014476425.1	transcriptional regulator Med	Regulator
P5657_RS18455 (P5657_18455)	-	3475265..3475822 (-)	558	WP_029317608.1	hypothetical protein	-
P5657_RS18460 (P5657_18460)	-	3475904..3476638 (-)	735	WP_032721340.1	hypothetical protein	-
P5657_RS18465 (P5657_18465)	yjzD	3476887..3477072 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
P5657_RS18470 (P5657_18470)	yjzC	3477118..3477297 (-)	180	WP_003245356.1	YjzC family protein	-
P5657_RS18475 (P5657_18475)	argF	3477383..3478342 (-)	960	WP_038828321.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=807082 P5657_RS18450 WP_014476425.1 3474221..3475174(-) (med) [Bacillus subtilis strain DSM 13019]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=807082 P5657_RS18450 WP_014476425.1 3474221..3475174(-) (med) [Bacillus subtilis strain DSM 13019]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGATGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAACAAAGG
CACCCTTGAGGGCGGCGACCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGGACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGTTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997