Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   P5657_RS18445 Genome accession   NZ_CP120621
Coordinates   3474015..3474206 (-) Length   63 a.a.
NCBI ID   WP_038828822.1    Uniprot ID   A0A162UVG6
Organism   Bacillus subtilis strain DSM 13019     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3469015..3479206
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5657_RS18420 (P5657_18420) appD 3469343..3470329 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  P5657_RS18425 (P5657_18425) yjaZ 3470521..3471306 (-) 786 WP_021479557.1 DUF2268 domain-containing protein -
  P5657_RS18430 (P5657_18430) fabF 3471382..3472623 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  P5657_RS18435 (P5657_18435) fabH 3472646..3473584 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  P5657_RS18440 (P5657_18440) yjzB 3473749..3473985 (+) 237 WP_072173825.1 spore coat protein YjzB -
  P5657_RS18445 (P5657_18445) comZ 3474015..3474206 (-) 192 WP_038828822.1 ComG operon transcriptional repressor ComZ Regulator
  P5657_RS18450 (P5657_18450) med 3474221..3475174 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  P5657_RS18455 (P5657_18455) - 3475265..3475822 (-) 558 WP_029317608.1 hypothetical protein -
  P5657_RS18460 (P5657_18460) - 3475904..3476638 (-) 735 WP_032721340.1 hypothetical protein -
  P5657_RS18465 (P5657_18465) yjzD 3476887..3477072 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  P5657_RS18470 (P5657_18470) yjzC 3477118..3477297 (-) 180 WP_003245356.1 YjzC family protein -
  P5657_RS18475 (P5657_18475) argF 3477383..3478342 (-) 960 WP_038828321.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7244.30 Da        Isoelectric Point: 4.2564

>NTDB_id=807081 P5657_RS18445 WP_038828822.1 3474015..3474206(-) (comZ) [Bacillus subtilis strain DSM 13019]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDTKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=807081 P5657_RS18445 WP_038828822.1 3474015..3474206(-) (comZ) [Bacillus subtilis strain DSM 13019]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACACTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A162UVG6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

98.413

100

0.984