Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | P5657_RS11950 | Genome accession | NZ_CP120621 |
| Coordinates | 2286657..2287694 (+) | Length | 345 a.a. |
| NCBI ID | WP_277709888.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain DSM 13019 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2281657..2292694
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5657_RS11925 (P5657_11925) | rsbRD | 2281875..2282711 (+) | 837 | WP_021480027.1 | RsbT co-antagonist protein RsbRD | - |
| P5657_RS11930 (P5657_11930) | yqhB | 2282764..2284092 (-) | 1329 | WP_085186496.1 | hemolysin family protein | - |
| P5657_RS11935 (P5657_11935) | corA | 2284235..2285188 (+) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| P5657_RS11940 (P5657_11940) | - | 2285190..2285582 (+) | 393 | WP_170948341.1 | hypothetical protein | - |
| P5657_RS11945 (P5657_11945) | comGA | 2285600..2286670 (+) | 1071 | WP_085186492.1 | competence protein ComGA | Machinery gene |
| P5657_RS11950 (P5657_11950) | comGB | 2286657..2287694 (+) | 1038 | WP_277709888.1 | comG operon protein ComGB | Machinery gene |
| P5657_RS11955 (P5657_11955) | comGC | 2287708..2288004 (+) | 297 | WP_024573391.1 | comG operon protein ComGC | Machinery gene |
| P5657_RS11960 (P5657_11960) | comGD | 2287994..2288425 (+) | 432 | WP_024573390.1 | comG operon protein ComGD | Machinery gene |
| P5657_RS11965 (P5657_11965) | comGE | 2288409..2288756 (+) | 348 | WP_046160583.1 | ComG operon protein 5 | Machinery gene |
| P5657_RS11970 (P5657_11970) | comGF | 2288782..2289165 (+) | 384 | WP_085186490.1 | ComG operon protein ComGF | Machinery gene |
| P5657_RS11975 (P5657_11975) | comGG | 2289166..2289540 (+) | 375 | WP_021480019.1 | ComG operon protein ComGG | Machinery gene |
| P5657_RS11980 (P5657_11980) | spoIITA | 2289612..2289791 (+) | 180 | WP_003230176.1 | YqzE family protein | - |
| P5657_RS11985 (P5657_11985) | yqzG | 2289833..2290159 (-) | 327 | WP_085186489.1 | YqzG/YhdC family protein | - |
| P5657_RS11990 (P5657_11990) | tapA | 2290430..2291191 (+) | 762 | WP_277709892.1 | amyloid fiber anchoring/assembly protein TapA | - |
| P5657_RS11995 (P5657_11995) | sipW | 2291175..2291747 (+) | 573 | WP_134991456.1 | signal peptidase I SipW | - |
| P5657_RS12000 (P5657_12000) | tasA | 2291812..2292597 (+) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39871.28 Da Isoelectric Point: 9.6013
>NTDB_id=807056 P5657_RS11950 WP_277709888.1 2286657..2287694(+) (comGB) [Bacillus subtilis strain DSM 13019]
MIKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTFLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQSDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFFFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKYQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLLPMYQMMNQM
MIKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTFLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQSDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFFFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKYQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=807056 P5657_RS11950 WP_277709888.1 2286657..2287694(+) (comGB) [Bacillus subtilis strain DSM 13019]
ATGATAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTTTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGTCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTTTTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGTTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAATATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCTGCAATGATCTTACTTGTGTATTTATCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGATAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTTTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGTCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTTTTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGTTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAATATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCTGCAATGATCTTACTTGTGTATTTATCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
96.594 |
93.623 |
0.904 |