Detailed information NTG0807029

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: P5657_RS05145
• Genome accession: NZ_CP120621
• Coordinates: 981499..982644 (-)
• Length: 381 a.a.
• NCBI ID: WP_038829812.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DSM 13019
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 976499..987644

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5657_RS05120 (P5657_05120)	pbpG	976755..978830 (-)	2076	WP_085185512.1	transglycosylase domain-containing protein	-
P5657_RS05125 (P5657_05125)	speE	979032..979862 (+)	831	WP_003227543.1	spermidine synthase	-
P5657_RS05130 (P5657_05130)	speB	979923..980795 (+)	873	WP_003227545.1	agmatinase	-
P5657_RS05135 (P5657_05135)	ywhH	980826..981298 (-)	473	Protein_965	YbaK/EbsC family protein	-
P5657_RS05140 (P5657_05140)	phrF	981396..981515 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
P5657_RS05145 (P5657_05145)	rapF	981499..982644 (-)	1146	WP_038829812.1	response regulator aspartate phosphatase RapF	Regulator
P5657_RS21395	-	982647..982877 (+)	231	WP_069703618.1	hypothetical protein	-
P5657_RS05150 (P5657_05150)	ywhK	982874..984229 (+)	1356	WP_134154701.1	YncE family protein	-
P5657_RS05155 (P5657_05155)	ywhL	984269..985645 (+)	1377	WP_277710304.1	YncE family protein	-
P5657_RS05160 (P5657_05160)	albG	985651..986352 (-)	702	WP_277710305.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
P5657_RS05165 (P5657_05165)	albF	986349..987629 (-)	1281	WP_085185520.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45626.14 Da
• Isoelectric Point: 5.2517

>NTDB_id=807029 P5657_RS05145 WP_038829812.1 981499..982644(-) (rapF) [Bacillus subtilis strain DSM 13019]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=807029 P5657_RS05145 WP_038829812.1 981499..982644(-) (rapF) [Bacillus subtilis strain DSM 13019]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572