Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | P5649_RS13550 | Genome accession | NZ_CP120613 |
| Coordinates | 2597286..2598323 (+) | Length | 345 a.a. |
| NCBI ID | WP_009967727.1 | Uniprot ID | A0AAE2SM96 |
| Organism | Bacillus subtilis strain DSM 23521 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2592286..2603323
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5649_RS13530 (P5649_13530) | rsbRD | 2592504..2593340 (+) | 837 | WP_004398754.1 | RsbT co-antagonist protein RsbRD | - |
| P5649_RS13535 (P5649_13535) | yqhB | 2593393..2594721 (-) | 1329 | WP_009967730.1 | hemolysin family protein | - |
| P5649_RS13540 (P5649_13540) | corA | 2594864..2595817 (+) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| P5649_RS13545 (P5649_13545) | comGA | 2596229..2597299 (+) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| P5649_RS13550 (P5649_13550) | comGB | 2597286..2598323 (+) | 1038 | WP_009967727.1 | comG operon protein ComGB | Machinery gene |
| P5649_RS13555 (P5649_13555) | comGC | 2598337..2598633 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| P5649_RS13560 (P5649_13560) | comGD | 2598623..2599054 (+) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| P5649_RS13565 (P5649_13565) | comGE | 2599038..2599385 (+) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| P5649_RS13570 (P5649_13570) | comGF | 2599411..2599794 (+) | 384 | WP_003230168.1 | ComG operon protein ComGF | Machinery gene |
| P5649_RS13575 (P5649_13575) | comGG | 2599795..2600169 (+) | 375 | WP_003230170.1 | ComG operon protein ComGG | Machinery gene |
| P5649_RS13580 (P5649_13580) | spoIITA | 2600240..2600419 (+) | 180 | WP_003230176.1 | YqzE family protein | - |
| P5649_RS13585 (P5649_13585) | yqzG | 2600461..2600787 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| P5649_RS13590 (P5649_13590) | tapA | 2601059..2601820 (+) | 762 | WP_004399106.1 | amyloid fiber anchoring/assembly protein TapA | - |
| P5649_RS13595 (P5649_13595) | sipW | 2601804..2602376 (+) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| P5649_RS13600 (P5649_13600) | tasA | 2602440..2603225 (+) | 786 | WP_004398632.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39762.26 Da Isoelectric Point: 9.6257
>NTDB_id=806920 P5649_RS13550 WP_009967727.1 2597286..2598323(+) (comGB) [Bacillus subtilis strain DSM 23521]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSLFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSLFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=806920 P5649_RS13550 WP_009967727.1 2597286..2598323(+) (comGB) [Bacillus subtilis strain DSM 23521]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCTTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCTTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
93.623 |
0.936 |