Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   RL451_RS00860 Genome accession   NZ_CP134617
Coordinates   139430..140170 (+) Length   246 a.a.
NCBI ID   WP_000216879.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IPLA16     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 134430..145170
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RL451_RS00835 (RL451_00835) yhaM 134848..135789 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  RL451_RS00840 (RL451_00840) - 135910..136872 (-) 963 WP_000782127.1 foldase protein PrsA -
  RL451_RS00845 (RL451_00845) - 137077..137634 (-) 558 WP_000477954.1 DUF3267 domain-containing protein -
  RL451_RS00850 (RL451_00850) - 138367..138732 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  RL451_RS00855 (RL451_00855) - 138874..139296 (-) 423 WP_000004981.1 HIT family protein -
  RL451_RS00860 (RL451_00860) pptA 139430..140170 (+) 741 WP_000216879.1 ABC transporter ATP-binding protein EcsA Regulator
  RL451_RS00865 (RL451_00865) ecsB 140163..141386 (+) 1224 WP_000551840.1 ABC transporter permease EcsB -
  RL451_RS00870 (RL451_00870) traP 141510..142013 (-) 504 WP_000737976.1 signal transduction protein TRAP -
  RL451_RS00875 (RL451_00875) - 142176..142286 (+) 111 WP_001790154.1 hypothetical protein -
  RL451_RS00880 (RL451_00880) hemE 142276..143313 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  RL451_RS00885 (RL451_00885) hemH 143371..144294 (+) 924 WP_000162886.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27715.11 Da        Isoelectric Point: 4.7504

>NTDB_id=806924 RL451_RS00860 WP_000216879.1 139430..140170(+) (pptA) [Staphylococcus aureus strain IPLA16]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDREEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHKQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=806924 RL451_RS00860 WP_000216879.1 139430..140170(+) (pptA) [Staphylococcus aureus strain IPLA16]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGAAGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAAACAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545