Detailed information NTG0806891

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: P5649_RS06745
• Genome accession: NZ_CP120613
• Coordinates: 1309158..1310303 (-)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DSM 23521
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1304158..1315303

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5649_RS06720 (P5649_06720)	pbpG	1304411..1306486 (-)	2076	WP_003227540.1	transglycosylase domain-containing protein	-
P5649_RS06725 (P5649_06725)	speE	1306688..1307518 (+)	831	WP_003227543.1	spermidine synthase	-
P5649_RS06730 (P5649_06730)	speB	1307579..1308451 (+)	873	WP_003227545.1	agmatinase	-
P5649_RS06735 (P5649_06735)	ywhH	1308483..1308956 (-)	474	WP_003227547.1	YbaK/EbsC family protein	-
P5649_RS06740 (P5649_06740)	phrF	1309055..1309174 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
P5649_RS06745 (P5649_06745)	rapF	1309158..1310303 (-)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
P5649_RS22130	-	1310306..1310536 (+)	231	WP_009968328.1	hypothetical protein	-
P5649_RS06750 (P5649_06750)	ywhK	1310533..1311888 (+)	1356	WP_003227552.1	YncE family protein	-
P5649_RS06755 (P5649_06755)	ywhL	1311927..1313303 (+)	1377	WP_003244415.1	YncE family protein	-
P5649_RS06760 (P5649_06760)	albG	1313309..1314010 (-)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
P5649_RS06765 (P5649_06765)	albF	1314007..1315287 (-)	1281	WP_003242974.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=806891 P5649_RS06745 WP_003227549.1 1309158..1310303(-) (rapF) [Bacillus subtilis strain DSM 23521]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=806891 P5649_RS06745 WP_003227549.1 1309158..1310303(-) (rapF) [Bacillus subtilis strain DSM 23521]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572