Detailed information NTG0806877

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: P5649_RS02720
• Genome accession: NZ_CP120613
• Coordinates: 521568..522716 (-)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain DSM 23521
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 516568..527716

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5649_RS02690 (P5649_02690)	yclO	517285..518232 (-)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-
P5649_RS02695 (P5649_02695)	ceuB	518225..519175 (-)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
P5649_RS02700 (P5649_02700)	thrD	519560..520924 (+)	1365	WP_009966541.1	aspartate kinase	-
P5649_RS02705 (P5649_02705)	yczN	521078..521191 (+)	114	WP_003234495.1	YjcZ family sporulation protein	-
P5649_RS02710 (P5649_02710)	yczM	521273..521362 (+)	90	WP_015482794.1	YjcZ family sporulation protein	-
P5649_RS02715 (P5649_02715)	phrC	521462..521584 (-)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
P5649_RS02720 (P5649_02720)	rapC	521568..522716 (-)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
P5649_RS02725 (P5649_02725)	yclK	522879..524300 (-)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
P5649_RS02730 (P5649_02730)	yclJ	524287..524970 (-)	684	WP_003246532.1	two-component system response regulator YclJ	-
P5649_RS02735 (P5649_02735)	yclI	525183..526643 (+)	1461	WP_003234506.1	ABC transporter permease	-
P5649_RS02740 (P5649_02740)	yclH	526659..527339 (+)	681	WP_003234507.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=806877 P5649_RS02720 WP_003246686.1 521568..522716(-) (rapC) [Bacillus subtilis strain DSM 23521]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=806877 P5649_RS02720 WP_003246686.1 521568..522716(-) (rapC) [Bacillus subtilis strain DSM 23521]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571