Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   P5637_RS13315 Genome accession   NZ_CP120601
Coordinates   2556571..2558886 (-) Length   771 a.a.
NCBI ID   WP_020452789.1    Uniprot ID   D9YRL1
Organism   Bacillus paralicheniformis strain PRO109     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2551571..2563886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5637_RS13275 (P5637_13275) - 2552036..2552467 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  P5637_RS13280 (P5637_13280) - 2552467..2552808 (+) 342 WP_020452785.1 Na(+)/H(+) antiporter subunit C -
  P5637_RS13285 (P5637_13285) - 2552801..2554279 (+) 1479 WP_025809735.1 Na+/H+ antiporter subunit D -
  P5637_RS13290 (P5637_13290) - 2554285..2554761 (+) 477 WP_020452787.1 Na+/H+ antiporter subunit E -
  P5637_RS13295 (P5637_13295) - 2554761..2555045 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  P5637_RS13300 (P5637_13300) mnhG 2555029..2555403 (+) 375 WP_023856153.1 monovalent cation/H(+) antiporter subunit G -
  P5637_RS13305 (P5637_13305) - 2555440..2555829 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  P5637_RS13310 (P5637_13310) comA 2555846..2556484 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  P5637_RS13315 (P5637_13315) comP 2556571..2558886 (-) 2316 WP_020452789.1 ATP-binding protein Regulator
  P5637_RS13320 (P5637_13320) comX 2558907..2559077 (-) 171 WP_020452790.1 competence pheromone ComX -
  P5637_RS13325 (P5637_13325) - 2559049..2559960 (-) 912 WP_020452791.1 polyprenyl synthetase family protein -
  P5637_RS13330 (P5637_13330) degQ 2560147..2560287 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  P5637_RS13335 (P5637_13335) - 2560899..2561120 (+) 222 WP_230368259.1 hypothetical protein -
  P5637_RS13340 (P5637_13340) - 2561162..2562382 (-) 1221 WP_101561518.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 771 a.a.        Molecular weight: 89288.10 Da        Isoelectric Point: 7.0414

>NTDB_id=806659 P5637_RS13315 WP_020452789.1 2556571..2558886(-) (comP) [Bacillus paralicheniformis strain PRO109]
MKSYYNKVSLVLILLSFIYVLYVCYLSFNNNLVGLKVKNLDEYSLEVVEVKKHTLAADYAELKEGDIIHRINGQQVPFKK
DKEYTLSNVLTLTIERNGKVFENDSLIYLDLVSYDSFFIFIIPLIFYFLCLICVYFIFKVNKSKNLFSAFLLVLFLLITS
IAYVSAGAVARGDTFSRFVNILTFLAVPTSYLHFIYRYFKEIGKTFFSNKVFLLYLIPFINLILEAGLYLFEFEGSILKS
INLLSFFISTVIVFILITYALIKFKYSQQSYLLKILMLMNFIALVPFLFFYVLPMLVFGDYIFSAIVVSPFLLLIPLSLV
YQFMSNKIYDIEFLIGRLKYYSFLAIIPTSLIITILAIVKHQEGEFFTVQVTIFTYLIMVGVFYLKEIIDFRFRLKRFSE
KFNYQDSIFKFTQTIRTFTSLNQVLMELKQIVLDVLLVNNIYMLKVKNDGSVSMLENDAEEKPWIPYEQEVTKVITDIGK
IVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLEHVKKEGPNPAWLNK
LMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQELRPQLLY
DLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKANEVLIMLVCIKEKVVLHYED
DGIGFDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 2316 bp        

>NTDB_id=806659 P5637_RS13315 WP_020452789.1 2556571..2558886(-) (comP) [Bacillus paralicheniformis strain PRO109]
ATGAAGTCATATTATAACAAGGTTTCACTAGTTCTCATATTGTTAAGTTTTATTTATGTTCTCTATGTTTGCTATCTTAG
TTTTAATAATAATCTAGTTGGGTTAAAGGTGAAAAATCTTGATGAATACAGTCTTGAAGTTGTGGAAGTGAAAAAACACA
CTTTAGCCGCTGATTATGCAGAATTAAAAGAAGGAGATATCATTCATAGAATAAATGGGCAGCAGGTTCCATTTAAAAAA
GATAAGGAATATACATTGTCAAACGTTTTAACGTTAACAATTGAAAGAAATGGGAAAGTATTTGAGAATGATTCTCTGAT
ATATTTGGATTTAGTCAGTTATGACAGTTTTTTTATATTTATCATTCCGTTGATCTTTTACTTTTTATGTTTAATTTGTG
TGTATTTTATTTTTAAAGTAAACAAATCTAAAAATCTTTTCTCAGCATTTTTATTAGTCCTATTTCTGCTTATTACTTCT
ATAGCTTATGTTAGTGCAGGCGCAGTTGCAAGAGGTGACACTTTCAGTAGATTTGTAAATATACTTACTTTTTTAGCTGT
TCCAACTAGCTACTTACATTTTATTTATCGATACTTTAAAGAGATAGGGAAAACATTTTTCAGTAATAAAGTTTTTTTAC
TTTATTTAATACCATTTATAAACCTCATACTTGAAGCTGGTTTATACTTATTTGAATTTGAGGGAAGTATTCTAAAAAGT
ATTAACTTATTGTCGTTCTTTATTTCGACGGTTATTGTTTTTATTCTGATTACATATGCCTTAATTAAATTCAAGTATTC
TCAACAGTCCTACTTATTGAAAATATTAATGTTGATGAACTTCATTGCATTGGTACCTTTTTTGTTTTTCTATGTACTTC
CTATGCTGGTCTTTGGCGATTATATTTTCTCGGCCATTGTTGTGTCCCCGTTTCTGTTGCTGATTCCTTTATCTTTGGTA
TATCAATTTATGTCTAATAAAATATATGATATTGAATTTTTAATTGGTCGATTGAAATATTATAGTTTTTTAGCGATAAT
TCCAACTTCTTTAATTATTACTATTTTAGCCATTGTTAAGCATCAAGAAGGAGAATTTTTCACAGTACAGGTTACAATCT
TTACATATCTTATCATGGTAGGCGTTTTCTATTTAAAAGAAATTATTGATTTTCGCTTTCGGCTAAAGCGCTTTTCAGAA
AAATTTAACTACCAGGATAGTATTTTTAAATTTACTCAAACCATTCGAACATTTACGTCTTTAAATCAAGTTTTAATGGA
GTTAAAACAAATCGTTTTGGACGTGCTTCTTGTTAATAATATTTATATGCTCAAAGTAAAAAACGATGGATCGGTATCGA
TGCTAGAGAATGATGCAGAAGAAAAACCGTGGATCCCGTACGAACAAGAAGTAACCAAGGTCATCACCGACATCGGTAAA
ATCGTCGAAGTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACTTCTTATGTCATGCTGTGTTTGTCGGT
TTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGTTTTATACGAGTGTTTCCCTGGAAA
ACGTCTTGAAAATCGGCGAGCTGATGGAGCATCTGGAACATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTGAATAAA
TTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTGGCCCGTGATCTTCATGATTCTGTGCTGCAGGACATGATTTC
CTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCAGGCAAAGGCTCA
TCAATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGTCAGGAGCTGAGGCCGCAGCTGTTGTAC
GATCTCGGACTGGTCAAAGCCCTTTCGAAACTGGCGGCACAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAA
TACGGAAAGGTTCTCAAAGGTGCTCGACCTGGACACGCAGCTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATG
CGGTTAAACACTCGAAAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGAT
GACGGCATCGGTTTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGCATTCGCGAGCGAGTCCG
CGCGCTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCGCCATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB D9YRL1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.419

100

0.537