Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   P5638_RS16865 Genome accession   NZ_CP120599
Coordinates   3290953..3291903 (-) Length   316 a.a.
NCBI ID   WP_024426541.1    Uniprot ID   -
Organism   Bacillus safensis strain PRO114     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3285953..3296903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5638_RS16835 (P5638_16835) - 3285994..3286611 (-) 618 WP_024425492.1 TVP38/TMEM64 family protein -
  P5638_RS16840 (P5638_16840) - 3286768..3287130 (+) 363 WP_024425491.1 hypothetical protein -
  P5638_RS16845 (P5638_16845) - 3287202..3288156 (-) 955 Protein_3278 LCP family protein -
  P5638_RS16850 (P5638_16850) - 3288295..3289239 (-) 945 WP_208946560.1 siderophore ABC transporter substrate-binding protein -
  P5638_RS16855 (P5638_16855) - 3289261..3290019 (-) 759 WP_024426539.1 ATP-binding cassette domain-containing protein -
  P5638_RS16860 (P5638_16860) - 3290010..3290960 (-) 951 WP_024425487.1 iron chelate uptake ABC transporter family permease subunit -
  P5638_RS16865 (P5638_16865) ceuB 3290953..3291903 (-) 951 WP_024426541.1 ABC transporter permease Machinery gene
  P5638_RS16870 (P5638_16870) - 3292065..3292343 (-) 279 WP_056766863.1 barstar family protein -
  P5638_RS16875 (P5638_16875) - 3292545..3293027 (-) 483 WP_024425482.1 hypothetical protein -
  P5638_RS16880 (P5638_16880) comK 3293327..3293905 (-) 579 WP_034282183.1 competence protein ComK Regulator
  P5638_RS16885 (P5638_16885) - 3294195..3294431 (+) 237 WP_008348804.1 IDEAL domain-containing protein -
  P5638_RS16890 (P5638_16890) - 3294488..3295348 (-) 861 WP_024425480.1 SDR family oxidoreductase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34960.36 Da        Isoelectric Point: 9.7476

>NTDB_id=806533 P5638_RS16865 WP_024426541.1 3290953..3291903(-) (ceuB) [Bacillus safensis strain PRO114]
MKLYQLSLLFVCLACISLFVGVQDLSILQLFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILVAMLVFTHVNPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=806533 P5638_RS16865 WP_024426541.1 3290953..3291903(-) (ceuB) [Bacillus safensis strain PRO114]
ATGAAATTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTGCAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCAAAGCTTGGTATTTTAGTAGCAATGCTTGTTTTTACACATGTGAATCCACTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGAGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCCGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGAATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAAAGTCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GACTCATGGTAGGCATCATCGGAAGTGCGATCTTCCTGTATATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.163

95.253

0.487