Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   P5638_RS10925 Genome accession   NZ_CP120599
Coordinates   2146989..2147792 (+) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus safensis strain PRO114     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2141989..2152792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5638_RS10905 (P5638_10905) - 2141992..2142846 (+) 855 WP_025092991.1 TlyA family RNA methyltransferase -
  P5638_RS10910 (P5638_10910) argR 2143010..2143459 (+) 450 WP_024422938.1 transcriptional regulator ArgR -
  P5638_RS10915 (P5638_10915) recN 2143493..2145226 (+) 1734 WP_025092992.1 DNA repair protein RecN Machinery gene
  P5638_RS10920 (P5638_10920) spoIVB 2145427..2146704 (+) 1278 WP_277721863.1 SpoIVB peptidase -
  P5638_RS10925 (P5638_10925) spo0A 2146989..2147792 (+) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  P5638_RS10930 (P5638_10930) - 2148249..2149349 (+) 1101 WP_034622321.1 Rap family tetratricopeptide repeat protein -
  P5638_RS10935 (P5638_10935) - 2149577..2150314 (+) 738 WP_024422932.1 glycerophosphodiester phosphodiesterase -
  P5638_RS10940 (P5638_10940) - 2150351..2150587 (-) 237 WP_024422931.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=806513 P5638_RS10925 WP_024422935.1 2146989..2147792(+) (spo0A) [Bacillus safensis strain PRO114]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=806513 P5638_RS10925 WP_024422935.1 2146989..2147792(+) (spo0A) [Bacillus safensis strain PRO114]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATCACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTCGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884